name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2993_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(140..832)
|
Crp/Fnr family transcriptional regulator n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A234A6
rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EXL02040.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
CRP/FNR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2993_2
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(909..1904)
|
thiamine biosynthesis protein ApbE n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B7BB5E
rbh
NosX protein {ECO:0000313|EMBL:EFM55733.1}; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
nosX; thiamine biosynthesis lipoprotein; K03734 thiamine biosynthesis lipoprotein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2026..2547)
|
NosL protein n=1 Tax=Ochrobactrum anthropi RepID=C0A1F3_OCHAN
Copper chaperone {ECO:0000313|EMBL:EXL03369.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
NosL family protein
|
|
SCNpilot_expt_1000_bf_scaffold_2993_4
Brucella microti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2544..3374)
|
NosY permease n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A0B837
rbh
nosY; nitrous-oxide reductase, NosY component
rbh
Nitrous-oxide reductase, nosY component {ECO:0000313|EMBL:ACU49409.1}; TaxID=568815 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella microti (strain CCM 4915).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2993_5
Brucella neotomae, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3371..4279)
|
ABC transporter ATP-binding protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A39C35
rbh
NosF protein {ECO:0000313|EMBL:EEY02939.1}; TaxID=520456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella neotomae 5K33.;"
hypothetical protein; K01990 ABC-2 type transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4276..5676)
|
NosD protein n=1 Tax=Ochrobactrum anthropi RepID=C0A1F0_OCHAN
rbh
Carbohydrate-binding protein {ECO:0000313|EMBL:EXL03366.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
periplasmic copper-binding; K07218 nitrous oxidase accessory protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5682..7598)
|
Nitrous-oxide reductase {ECO:0000256|HAMAP-Rule:MF_00716}; EC=1.7.2.4 {ECO:0000256|HAMAP-Rule:MF_00716};; N(2)OR {ECO:0000256|HAMAP-Rule:MF_00716}; N2O reductase {ECO:0000256|HAMAP-Rule:MF_00716}; Flags: Precursor;; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
nitrous-oxide reductase n=1 Tax=Ochrobactrum anthropi RepID=UPI00028999B4
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7624..8124)
|
FMN-binding domain protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X743_OCHA4
FMN-binding domain-containing protein
NosR protein {ECO:0000313|EMBL:BAH28826.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2993_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8066..8635)
|
FMN-binding protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A50D71
FMN-binding domain-containing protein
FMN-binding domain protein {ECO:0000313|EMBL:ABS17047.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2993_10
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8596..9915)
|
FMN-binding protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A50D71
Transcriptional regulator NosR {ECO:0000313|EMBL:EFM55727.1}; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
FMN-binding domain protein
|
|
SCNpilot_expt_1000_bf_scaffold_2993_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10163..10456
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQ10_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79580.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2993_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10611..10964
|
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFQ0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69506.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2993_13
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11137..12027)
|
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EGF2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDQ02983.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
Allergen V5/Tpx-1 related
|
|
SCNpilot_expt_1000_bf_scaffold_2993_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12387..14573
|
Putative sensor histidine kinase id=2549649 bin=GWF1_Rhodobacteraceae_65_7 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
sensor histidine kinase
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2993_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14576..15223
|
Response regulator id=2549652 bin=GWF1_Rhodobacteraceae_65_7 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
response regulator protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2993_16
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15369..16148
|
Pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
pyrroline-5-carboxylate reductase n=1 Tax=Rhizobium giardinii RepID=UPI000378B432
rbh
Pyrroline-5-carboxylate reductase {ECO:0000313|EMBL:AHK47046.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2993_17
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16271..17365
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJQ2_AFIFE
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2993_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17449..18555)
|
ABC-2 type transporter n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BC71_PARDP
rbh
Mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:KGJ02616.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_19
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18552..19469)
|
multidrug ABC transporter ATP-binding protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F675
rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ02615.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC transporter related; K09687 antibiotic transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_20
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19466..20407)
|
Secretion protein HlyD family protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BC73_PARDP
rbh
secretion protein HlyD family protein; K01993 HlyD family secretion protein
rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABL73117.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2993_21
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20400..21035)
|
Transcriptional regulator, TetR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BC74_PARDP
TetR family transcriptional regulator {ECO:0000313|EMBL:KGJ19609.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2993_22
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21222..21512)
|
Plasmid stabilization protein n=1 Tax=Pandoraea sp. RB-44 RepID=V5UDL3_9BURK
Plasmid stabilization protein {ECO:0000313|EMBL:AHB75307.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
addiction module toxin, RelE/StbE family
|
|
SCNpilot_expt_1000_bf_scaffold_2993_23
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21500..21778)
|
CopG family transcriptional regulator n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003652CF0
Transcriptional regulator, CopG family {ECO:0000313|EMBL:CDM55925.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
transcriptional regulator, CopG family
|
|
SCNpilot_expt_1000_bf_scaffold_2993_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21857..23365)
|
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWJ1_9RHIZ
rbh
Guanine deaminase {ECO:0000313|EMBL:AHK46978.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23388..24284)
|
Inner-membrane translocator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV78_9RHIZ
rbh
Inner-membrane translocator {ECO:0000313|EMBL:EYR77873.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
inner-membrane translocator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24281..25318)
|
Putative ABC transporter, permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF70_9RHIZ
rbh
Putative ABC transporter, permease {ECO:0000313|EMBL:EYR77874.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter permease
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25315..26895)
|
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EYR77875.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EYR77875.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
monosaccharide-transporting ATPase (EC:3.6.3.17)
rbh
Monosaccharide-transporting ATPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWJ5_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27014..28075)
|
ABC-type transport system substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZI5_9RHIZ
rbh
ABC-type transport system substrate-binding protein {ECO:0000313|EMBL:EYR81954.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2993_29
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28122..28442)
|
NIPSNAP family containing protein n=3 Tax=Rhizobium meliloti RepID=F6C061_SINMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH82557.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2993_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28453..29982)
|
Choline dehydrogenase BetA {ECO:0000313|EMBL:EYR81952.1}; EC=1.1.99.1 {ECO:0000313|EMBL:EYR81952.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
CHDH; Choline dehydrogenase, mitochondrial (EC:1.1.99.1)
rbh
Choline dehydrogenase BetA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D809_9RHIZ
rbh
|