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SCNpilot_expt_1000_bf_scaffold_1345

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1345_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1345_2
unknown

Not on your lists

comp(59..607)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00035DCE46
SCNpilot_expt_1000_bf_scaffold_1345_3
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1124..1369
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00037B2BAE
Uncharacterized protein {ECO:0000313|EMBL:CDM56312.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1345_4
unknown

Not on your lists

1371..1793
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1345_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2054..2962
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZXN0_RHILW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI57489.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_1345_6
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3258..3854
DNA (597bp) protein (199aa)
UPI0003CE9D48 related cluster n=1 Tax=unknown RepID=UPI0003CE9D48
Uncharacterized protein {ECO:0000313|EMBL:ESY03247.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
SCNpilot_expt_1000_bf_scaffold_1345_7
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3915..4250
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FB84_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX62685.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_expt_1000_bf_scaffold_1345_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4322..4897
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00037780F4
Uncharacterized protein {ECO:0000313|EMBL:KDP72273.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_1345_9
bacterium YEK0313, Bacteria

Not on your lists

5461..6612
DNA (1152bp) protein (384aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ15360.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_expt_1000_bf_scaffold_1345_10
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6617..6946
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KII16978.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter sp. S26.;"
SCNpilot_expt_1000_bf_scaffold_1345_11
unknown

Not on your lists

6962..7453
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1345_12
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7468..7701)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000379BB51
Uncharacterized protein {ECO:0000313|EMBL:ESZ17697.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
SCNpilot_expt_1000_bf_scaffold_1345_13
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

7998..8729
DNA (732bp) protein (244aa)
PREDICTED: polycystic kidney disease protein 1-like 2-like n=1 Tax=Oreochromis niloticus RepID=UPI00039434B6
Krt9, EPPK, K9, Krt1-9; keratin 9; K07604 type I keratin, acidic
Keratin, type I cytoskeletal 9; Cytokeratin-9; Short=CK-9;; Keratin-9; Short=K9;; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
SCNpilot_expt_1000_bf_scaffold_1345_14
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8909..9406
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:AIC25723.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_expt_1000_bf_scaffold_1345_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9479..11380)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P8E0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37756.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1345_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11384..12604)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XRL0_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EHH07556.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1345_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12896..13867)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMP1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25233.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1345_18
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14143..14709)
DNA (567bp) protein (189aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Rhizobium sp. CF142 RepID=J2AV55_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB76801.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
site-specific recombinase
SCNpilot_expt_1000_bf_scaffold_1345_19
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14887..15231
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00037A672A
Uncharacterized protein {ECO:0000313|EMBL:KFL29545.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_1000_bf_scaffold_1345_20
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15228..15995
DNA (768bp) protein (256aa)
Putative sbcB protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CRI7_9RHOB
Putative sbcB protein {ECO:0000313|EMBL:EFO28825.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1345_21
unknown

Not on your lists

16083..16859
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1345_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16878..17159
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZWI1_RHILW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI55852.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
Displaying 22 items

View Taxonomy