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SCNpilot_expt_1000_bf_scaffold_1396

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1396_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..415
DNA (414bp) protein (138aa)
oxydo-reductase, aldo/keto reductase family (EC:1.1.1.-)
Aldo-keto reductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EU96_9RHIZ
Aldo-keto reductase {ECO:0000313|EMBL:EYR82257.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_1396_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

853..1929
DNA (1077bp) protein (359aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C0L0_RHILT rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJC72440.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
resistance nodulation cell division (RND) drug efflux pump, MFP component rbh
SCNpilot_expt_1000_bf_scaffold_1396_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1926..3011
DNA (1086bp) protein (362aa)
Probable protein secretion protein, HlyD family n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q5S9_RHIE6 rbh
putative HlyD family protein secretion protein rbh
Probable protein secretion protein, HlyD family {ECO:0000313|EMBL:ACE94560.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_expt_1000_bf_scaffold_1396_4
unknown

Not on your lists

2971..3618
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1396_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3820..6075
DNA (2256bp) protein (752aa)
ACR family transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI0003662049
ACR family transporter {ECO:0000313|EMBL:AHF87212.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
putative efflux transporter protein, acriflavin resistance family
SCNpilot_expt_1000_bf_scaffold_1396_6
unknown

Not on your lists

6053..6211
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1396_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6729..8774)
DNA (2046bp) protein (682aa)
Subtilisin-like serine protease n=1 Tax=Rhizobium sp. CF080 RepID=J2RT97_9RHIZ rbh
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EUC00047.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
subtilisin-like serine protease
SCNpilot_expt_1000_bf_scaffold_1396_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8764..9672)
DNA (909bp) protein (303aa)
V8-like Glu-specific endopeptidase n=1 Tax=Rhizobium sp. CF080 RepID=J3BPR7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUC00046.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1396_9
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10415..13366
DNA (2952bp) protein (984aa)
Possible multicopper oxidase n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4W5_9RHOB
Possible multicopper oxidase {ECO:0000313|EMBL:EDM30259.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;"
mnxG; multicopper oxidase
SCNpilot_expt_1000_bf_scaffold_1396_10
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13323..16619
DNA (3297bp) protein (1099aa)
Possible multicopper oxidase n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4W5_9RHOB
Possible multicopper oxidase {ECO:0000313|EMBL:EDM30259.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;"
multicopper oxidase
SCNpilot_expt_1000_bf_scaffold_1396_11
Roseivivax halodurans, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17069..18922
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4W6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETX12797.1}; TaxID=1449350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax halodurans JCM 10272.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1396_12
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18919..19512
DNA (594bp) protein (198aa)
Electron transport protein SCO1/SenC n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4W7_9RHOB
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EDM30261.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1396_13
unknown

Not on your lists

19798..20811
DNA (1014bp) protein (338aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1396_14
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20766..22796)
DNA (2031bp) protein (677aa)
oleate hydratase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000347BF4E
Myosin-crossreactive antigen {ECO:0000313|EMBL:EJK84627.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
myosin-cross-reactive antigen
SCNpilot_expt_1000_bf_scaffold_1396_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23167..24093
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003711C81 rbh
ABC transporter permease {ECO:0000313|EMBL:KDP71243.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1396_16
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24090..24854
DNA (765bp) protein (255aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030BF1DA rbh
Putative ABC transporter component {ECO:0000313|EMBL:AHK46695.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_expt_1000_bf_scaffold_1396_17
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24886..25743
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030A4C55 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP71241.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ABC transporter substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1396_18
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25765..26547
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E6892B
Putative transcriptional regulator protein, GntR family {ECO:0000313|EMBL:AHK46697.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1396_19
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26576..27316
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003077BDC
Uncharacterized protein {ECO:0000313|EMBL:KDP71239.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein; K06971
SCNpilot_expt_1000_bf_scaffold_1396_20
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27313..27813
DNA (501bp) protein (167aa)
Ureidoglycolate lyase {ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|SAAS:SAAS00181913};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein; K01483 ureidoglycolate hydrolase [EC:3.5.3.19]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F1763F
SCNpilot_expt_1000_bf_scaffold_1396_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27810..28766
DNA (957bp) protein (319aa)
putative ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E432A rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP71237.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_1396_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28802..29680)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWU7_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54792.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1396_23
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29682..30065)
DNA (384bp) protein (128aa)
Putative translation initiation inhibitor, YjgF family protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1F2_9RHIZ
Putative translation initiation inhibitor, YjgF family protein {ECO:0000313|EMBL:CCV10166.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1396_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30079..31362)
DNA (1284bp) protein (428aa)
Class III aminotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWU5_9RHIZ rbh
Class III aminotransferase {ECO:0000313|EMBL:EHK54790.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glutamate-1-semialdehyde aminotransferase rbh
SCNpilot_expt_1000_bf_scaffold_1396_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31376..33415)
DNA (2040bp) protein (680aa)
NADH:flavin oxidoreductase/NADH oxidase (EC:1.6.-.-) rbh
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWU4_9RHIZ rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EHK54789.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_1396_26
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33472..34959)
DNA (1488bp) protein (496aa)
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase,NAD(P)H-dependent {ECO:0000313|EMBL:CCV10163.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CCV10163.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
puuC; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC:1.2.1.-); K09472 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [EC:1.2.1.-] rbh
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase,NAD(P)H-dependent n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1U3_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_1396_27
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35148..35951)
DNA (804bp) protein (268aa)
UPI0003CDFA9C related cluster n=1 Tax=unknown RepID=UPI0003CDFA9C rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY90438.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1396_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35966..37246)
DNA (1281bp) protein (427aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWU1_9RHIZ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHK54786.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_1396_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37252..38058)
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDQ7_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCV10159.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1396_30
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38055..38744)
DNA (690bp) protein (230aa)
UPI0003CDF03A related cluster n=1 Tax=unknown RepID=UPI0003CDF03A rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY90441.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
spermidine/putrescine ABC transporter permease protein
Displaying items 1-30 of 82 in total

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