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SCNpilot_expt_1000_bf_scaffold_3583

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3583_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..102
DNA (102bp) protein (34aa)
adhCch; formaldehyde dehydrogenase (glutathione)/alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VIG0_RHILT
SCNpilot_expt_1000_bf_scaffold_3583_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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216..788
DNA (573bp) protein (191aa)
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00723}; EC=4.4.1.22 {ECO:0000256|HAMAP-Rule:MF_00723};; S-(hydroxymethyl)glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00723}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
glutathione-dependent formaldehyde-activating enzyme; K03396 S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] rbh
Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUE5_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_3583_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1008..1901)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYW3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR77834.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3583_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2340..3248
DNA (909bp) protein (303aa)
Polyphosphate kinase 2, PA0141 family n=1 Tax=Rhizobium sp. CF080 RepID=J2I678_9RHIZ
Polyphosphate kinase 2 {ECO:0000313|EMBL:EUC00131.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3583_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3306..4145)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HTC9_9RHIZ rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KDP72651.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
phytanoyl-CoA dioxygenase rbh
SCNpilot_expt_1000_bf_scaffold_3583_6
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4256..5293
DNA (1038bp) protein (346aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037D13BB
transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:ESY62192.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_3583_7
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5357..6823)
DNA (1467bp) protein (489aa)
MFS transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B497C2 rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:AJD44606.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
major facilitator transporter rbh
SCNpilot_expt_1000_bf_scaffold_3583_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8132..8461
DNA (330bp) protein (110aa)
Porin outer membrane protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTV7_RHITR
porin outer membrane protein
Porin outer membrane protein {ECO:0000313|EMBL:AGB74131.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3583_9
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8558..9172)
DNA (615bp) protein (205aa)
Isoflavonoid efflux regulatory protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QID5_9RHIZ
ifeR; Isoflavonoid efflux regulatory protein
Isoflavonoid efflux regulatory protein {ECO:0000313|EMBL:CDI12166.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_expt_1000_bf_scaffold_3583_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9301..9729)
DNA (429bp) protein (143aa)
UPI0003CFDF89 related cluster n=1 Tax=unknown RepID=UPI0003CFDF89
Glutathione S-transferase {ECO:0000313|EMBL:ESZ11773.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
glutathione S-transferase
Displaying 10 items

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