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SCNpilot_expt_1000_bf_scaffold_3956

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3956_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..764)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URH2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80934.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_3956_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1441)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB03_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80933.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_3956_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1601..2062
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB10_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGD89161.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_expt_1000_bf_scaffold_3956_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2149..2757
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0003101D67
ABC transporter permease {ECO:0000313|EMBL:EYR68643.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ankyrin
SCNpilot_expt_1000_bf_scaffold_3956_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2819..3682)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZF5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80612.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3956_6
unknown

Not on your lists

comp(3679..3798)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3956_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3806..4186)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000319D69F
Uncharacterized protein {ECO:0000313|EMBL:ENY80946.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_3956_8
unknown

Not on your lists

comp(4288..4653)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3956_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4771..5283)
DNA (513bp) protein (171aa)
Two component LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URH7_9SPHN
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:ENY80939.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LuxR family two component transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3956_10
unknown

Not on your lists

5436..5621
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3956_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5704..6807
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000365E893 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD24525.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
signal transduction histidine kinase LytS
SCNpilot_expt_1000_bf_scaffold_3956_12
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6804..7256
DNA (453bp) protein (151aa)
Response regulator of the LytR/AlgR family n=1 Tax=Methylomicrobium album BG8 RepID=H8GNE2_METAL
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EIC28371.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
two component transcriptional regulator, LytTR family protein
SCNpilot_expt_1000_bf_scaffold_3956_13
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7289..7600
DNA (312bp) protein (104aa)
Response regulator of the LytR/AlgR family n=1 Tax=Methylomicrobium album BG8 RepID=H8GNE2_METAL
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EIC28371.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
LytTR family two component transcriptional regulator; K08083 two-component system, LytT family, response regulator AlgR
SCNpilot_expt_1000_bf_scaffold_3956_14
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7659..8210)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Acinetobacter sp. ANC 3880 RepID=N9RZ32_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCNpilot_expt_1000_bf_scaffold_3956_15
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(8446..9024)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FC844
putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AFY56903.1}; Flags: Precursor;; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
SCNpilot_expt_1000_bf_scaffold_3956_16
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9139..9837
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 1867 RepID=N9RCH9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EXB46805.1}; TaxID=1310623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 146457.;"
lipoprotein
SCNpilot_expt_1000_bf_scaffold_3956_17
unknown

Not on your lists

comp(10069..10554)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3956_18
unknown

Not on your lists

10767..10940
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 18 items

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