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SCNpilot_expt_1000_bf_scaffold_5261

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5261_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1265)
DNA (1263bp) protein (421aa)
phosphate acetyl/butyryltransferase; K00625 phosphate acetyltransferase [EC:2.3.1.8]
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Nitratireductor indicus C115 RepID=K2NSA0_9RHIZ rbh
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase {ECO:0000313|EMBL:CDN94575.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_5261_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1273..3054)
DNA (1782bp) protein (594aa)
poly-beta-hydroxybutyrate polymerase domain protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Poly-beta-hydroxybutyrate polymerase domain protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4B9_9RHIZ rbh
Poly-beta-hydroxybutyrate polymerase domain protein {ECO:0000313|EMBL:EKF42206.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_5261_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3051..3668)
DNA (618bp) protein (206aa)
TetR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PMA2_9RHIZ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDN94573.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5261_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3857..4879)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4B3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF42208.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5261_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4889..6019)
DNA (1131bp) protein (377aa)
Multidrug resistance efflux pump n=1 Tax=Nitratireductor indicus C115 RepID=K2NWM1_9RHIZ rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:EKF42209.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
multidrug resistance efflux pump; K03543 multidrug resistance protein A rbh
SCNpilot_expt_1000_bf_scaffold_5261_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6061..7260)
DNA (1200bp) protein (400aa)
Sodium/glutamate symporter n=1 Tax=Nitratireductor indicus C115 RepID=K2NSA6_9RHIZ rbh
Sodium/glutamate symporter {ECO:0000313|EMBL:EKF42210.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
gltS; sodium/glutamate symporter rbh
SCNpilot_expt_1000_bf_scaffold_5261_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7376..7651)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4C4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42211.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5261_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7735..8295)
DNA (561bp) protein (187aa)
TetR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PMA7_9RHIZ rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EKF42212.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
h16_A3218; TetR/AcrR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5261_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8959..9183
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4B6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42213.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5261_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9218..9472
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWM6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42214.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_5261_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10570..10890
DNA (321bp) protein (107aa)
Secretion protein HlyD family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NSA9_9RHIZ
Secretion protein HlyD family protein {ECO:0000313|EMBL:EKF42215.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
HlyD family secretion protein; K01993 HlyD family secretion protein
SCNpilot_expt_1000_bf_scaffold_5261_12
unknown

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comp(10896..11147)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5261_13
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11498..11905
DNA (408bp) protein (136aa)
ABC transporter related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4C9_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EKF42216.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC transporter related; K13926 ribosome-dependent ATPase
Displaying 13 items

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