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SCNpilot_expt_1000_bf_scaffold_5528

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5528_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..4750
DNA (4749bp) protein (1583aa)
Apolipoprotein A1/A4/E domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2KUI2_9RHIZ rbh
Apolipoprotein A1/A4/E domain-containing protein {ECO:0000313|EMBL:EJJ24832.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5528_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4828..5703)
DNA (876bp) protein (292aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium sp. CF080 RepID=J3C9C0_9RHIZ
Chemoreceptor McpA {ECO:0000313|EMBL:EYR79612.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; K03406 methyl-accepting chemotaxis protein
SCNpilot_expt_1000_bf_scaffold_5528_3
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5669..6607)
DNA (939bp) protein (313aa)
Methyl-accepting chemotaxis protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PZ72_9RHIZ
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EKF58105.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
SCNpilot_expt_1000_bf_scaffold_5528_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6811..7116)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLB8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79753.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5528_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7941..8372
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L2M7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27299.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5528_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8369..9001
DNA (633bp) protein (211aa)
Relaxase/mobilization nuclease n=1 Tax=Rhizobium sp. CF142 RepID=J2AV47_9RHIZ
Relaxase/mobilization nuclease {ECO:0000313|EMBL:EJJ27300.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5528_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8989..9579
DNA (591bp) protein (197aa)
Relaxase/mobilization nuclease n=1 Tax=Rhizobium sp. CF142 RepID=J2AV47_9RHIZ
Relaxase/mobilization nuclease {ECO:0000313|EMBL:EJJ27300.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
relaxase/mobilization nuclease family protein
SCNpilot_expt_1000_bf_scaffold_5528_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9607..10104
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T6I3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27301.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5528_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10101..10331
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L1B9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27302.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5528_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10328..10894
DNA (567bp) protein (189aa)
Type IV secretory pathway, VirD4 component n=1 Tax=Rhizobium sp. CF142 RepID=J1SPX7_9RHIZ
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EJJ27303.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
type IV secretory pathway VirD4 components; K03205 type IV secretion system protein VirD4
SCNpilot_expt_1000_bf_scaffold_5528_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10900..11301)
DNA (402bp) protein (134aa)
Putative acyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9XES2_RHILT
Putative acyltransferase {ECO:0000313|EMBL:EJB07616.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
N-acetyltransferase GCN5
Displaying 11 items

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