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SCNpilot_expt_1000_bf_scaffold_648

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_648_1
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

829..1656
DNA (828bp) protein (276aa)
DNA methylase n=1 Tax=Empedobacter brevis RepID=UPI00037BA93E
Uncharacterized protein {ECO:0000313|EMBL:GAE65854.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
helicase
SCNpilot_expt_1000_bf_scaffold_648_2
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1869..2813
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNU1_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK57588.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
helix-turN-helix-domain containing protein arac type
SCNpilot_expt_1000_bf_scaffold_648_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2957..3475
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXG7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57587.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_648_4
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3480..3773
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:CDS92101.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
SCNpilot_expt_1000_bf_scaffold_648_5
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3833..5203)
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDS92100.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
RagB/SusD family protein
SCNpilot_expt_1000_bf_scaffold_648_6
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5216..8413)
DNA (3198bp) protein (1066aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM0_9SPHI rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:CDS92099.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_648_7
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8451..9863)
DNA (1413bp) protein (471aa)
Redoxin domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBL9_9SPHI rbh
Redoxin domain protein {ECO:0000313|EMBL:CDS92098.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
redoxin domain protein
SCNpilot_expt_1000_bf_scaffold_648_8
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10176..10559
DNA (384bp) protein (128aa)
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF51_SPHS2
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDS92097.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_1000_bf_scaffold_648_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10573..10980
DNA (408bp) protein (136aa)
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF52_SPHS2
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ76745.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_648_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10995..11357
DNA (363bp) protein (121aa)
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF53_SPHS2
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ76746.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_648_11
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11361..12440
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Myroides odoratimimus RepID=K1I0V5_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGE13696.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_648_12
unknown

Not on your lists

12470..12919
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_648_13
unknown

Not on your lists

comp(13144..13344)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_648_14
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13511..14344)
DNA (834bp) protein (278aa)
Putative phage tail component domain protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXF9_9SPHI rbh
Putative phage tail component domain protein {ECO:0000313|EMBL:EFK57579.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
tetracycline regulation of excision RteC rbh
SCNpilot_expt_1000_bf_scaffold_648_15
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14429..15673)
DNA (1245bp) protein (415aa)
Transporter, major facilitator family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTV8_9SPHI rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEI93588.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein; K07785 MFS transporter, NRE family, putaive nickel resistance protein rbh
SCNpilot_expt_1000_bf_scaffold_648_16
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15696..16019)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTV9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93589.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_648_17
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16205..16630)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2V5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AIL44270.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCNpilot_expt_1000_bf_scaffold_648_18
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16668..18506)
DNA (1839bp) protein (613aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Putative cadmium-exporting ATPase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2V6_9FLAO rbh
Putative cadmium-exporting ATPase {ECO:0000313|EMBL:EFK34667.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_expt_1000_bf_scaffold_648_19
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18688..19884)
DNA (1197bp) protein (399aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTW2_9SPHI rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEI93592.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
HlyD family secretion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_expt_1000_bf_scaffold_648_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19902..24281)
DNA (4380bp) protein (1460aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTW3_9SPHI rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EEI93593.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
AcrB/AcrD/AcrF family heavy metal cation efflux protein; K07239 heavy-metal exporter, HME family
SCNpilot_expt_1000_bf_scaffold_648_21
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24302..24910)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTW4_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI93594.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_648_22
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24922..25563)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTW5_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI93595.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_648_23
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25722..25991)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTW6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93596.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
SCNpilot_expt_1000_bf_scaffold_648_24
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26574..27194)
DNA (621bp) protein (207aa)
Protein YdjA n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYX5_9BACT
Nitroreductase {ECO:0000313|EMBL:AHM60996.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
nitroreductase
SCNpilot_expt_1000_bf_scaffold_648_25
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27194..29107)
DNA (1914bp) protein (638aa)
Heavy metal translocating P-type ATPase n=1 Tax=Joostella marina DSM 19592 RepID=I3C6U0_9FLAO rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIJ39333.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting rbh
SCNpilot_expt_1000_bf_scaffold_648_26
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29112..29366)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0X6_GRAFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL66271.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
SCNpilot_expt_1000_bf_scaffold_648_27
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29533..30393
DNA (861bp) protein (287aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Joostella marina DSM 19592 RepID=I3C6T9_9FLAO rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EIJ39332.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_648_28
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30421..32418)
DNA (1998bp) protein (666aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZC4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDS98960.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_648_29
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33119..33922)
DNA (804bp) protein (268aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W439_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ETZ21156.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_648_30
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33947..34987)
DNA (1041bp) protein (347aa)
Luciferase family oxidoreductase, group 1 n=1 Tax=Imtechella halotolerans K1 RepID=I0W7Q9_9FLAO
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EID72425.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
luciferase family oxidoreductase, group 1
Displaying items 1-30 of 39 in total

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