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SCNpilot_expt_1000_bf_scaffold_2086

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2086_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..581
DNA (579bp) protein (193aa)
Glycosyl transferase family 39 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ER08_9RHIZ
Glycosyl transferase family 39 {ECO:0000313|EMBL:CCV06528.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
glycosyl transferase family protein
SCNpilot_expt_1000_bf_scaffold_2086_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

589..1410
DNA (822bp) protein (274aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EP49_9RHIZ rbh
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:CDX17557.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
PAP2 superfamily protein
SCNpilot_expt_1000_bf_scaffold_2086_3
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1438..2109)
DNA (672bp) protein (224aa)
UPI0003CDEC2B related cluster n=1 Tax=unknown RepID=UPI0003CDEC2B rbh
Transcriptional regulator {ECO:0000313|EMBL:ESY83102.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
FMN-binding negative transcriptional regulator; K07734 transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2086_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2183..2533)
DNA (351bp) protein (117aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Rhizobium sp. CF080 RepID=J3CX75_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGD89173.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2086_5
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2631..3743)
DNA (1113bp) protein (371aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhizobium sp. CF080 RepID=J2TN73_9RHIZ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EUB98517.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
SCNpilot_expt_1000_bf_scaffold_2086_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3827..5434)
DNA (1608bp) protein (536aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2L4F0_9RHIZ rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:EUB98516.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
ABC-type dipeptide transport system, periplasmic component rbh
SCNpilot_expt_1000_bf_scaffold_2086_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5595..6527
DNA (933bp) protein (311aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3CWU0_9RHIZ rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EUB98515.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2086_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6531..7205)
DNA (675bp) protein (225aa)
UPI0003CF122C related cluster n=1 Tax=unknown RepID=UPI0003CF122C rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX39465.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
alpha/beta hydrolase fold protein; K07018 rbh
SCNpilot_expt_1000_bf_scaffold_2086_9
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7442..8605
DNA (1164bp) protein (388aa)
cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Cysteine desulfurase {ECO:0000313|EMBL:ADV13500.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ADV13500.1};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Cysteine desulfurase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGA9_MESCW rbh
SCNpilot_expt_1000_bf_scaffold_2086_10
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8844..10361
DNA (1518bp) protein (506aa)
UPI0003CE3BD2 related cluster n=1 Tax=unknown RepID=UPI0003CE3BD2 rbh
Cysteine desulfarase {ECO:0000313|EMBL:ESW92749.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB rbh
SCNpilot_expt_1000_bf_scaffold_2086_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10358..10597
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRT6_HYPDA
Uncharacterized protein {ECO:0000313|EMBL:CDX25805.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2086_12
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10631..11386
DNA (756bp) protein (252aa)
UPI0003CE7431 related cluster n=1 Tax=unknown RepID=UPI0003CE7431 rbh
Transporter {ECO:0000313|EMBL:ESZ55281.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
FeS assembly ATPase SufC rbh
SCNpilot_expt_1000_bf_scaffold_2086_13
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11435..12703
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F3U6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV06536.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K09015 Fe-S cluster assembly protein SufD rbh
SCNpilot_expt_1000_bf_scaffold_2086_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13371..14003
DNA (633bp) protein (211aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJN6_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2086_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14009..14401
DNA (393bp) protein (131aa)
UPI0003CF2E79 related cluster n=1 Tax=unknown RepID=UPI0003CF2E79
FeS assembly SUF system protein {ECO:0000313|EMBL:ETA72729.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2086_16
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14510..14890
DNA (381bp) protein (127aa)
UPI00039EFEC5 related cluster n=1 Tax=unknown RepID=UPI00039EFEC5
FeS cluster assembly protein {ECO:0000313|EMBL:CDX28502.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
FeS assembly scaffold SufA; K13628 iron-sulfur cluster assembly protein
SCNpilot_expt_1000_bf_scaffold_2086_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14970..15464)
DNA (495bp) protein (165aa)
UPI0003CE689A related cluster n=1 Tax=unknown RepID=UPI0003CE689A rbh
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:CDX25667.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glutathione-dependent formaldehyde-activating GFA rbh
SCNpilot_expt_1000_bf_scaffold_2086_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15556..15879
DNA (324bp) protein (108aa)
TfoX domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJP0_9RHIZ
TfoX domain-containing protein {ECO:0000313|EMBL:CDX39495.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
TfoX domain-containing protein; K07343 DNA transformation protein and related proteins
Displaying 18 items

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