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SCNpilot_expt_1000_bf_scaffold_2107

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2107_1
unknown

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2..217
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2107_2
Thermus sp. 2.9, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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367..1758
DNA (1392bp) protein (464aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1577051 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. 2.9.;"
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NAZ8_9DEIN
SCNpilot_expt_1000_bf_scaffold_2107_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1812..3332
DNA (1521bp) protein (507aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EDD328
glycerol-3-phosphate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2107_4
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3343..3507)
DNA (165bp) protein (55aa)
UPI0003CE3061 related cluster n=1 Tax=unknown RepID=UPI0003CE3061
Uncharacterized protein {ECO:0000313|EMBL:ESX63597.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
SCNpilot_expt_1000_bf_scaffold_2107_5
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3504..4559)
DNA (1056bp) protein (352aa)
UPI0003CE6D8B related cluster n=1 Tax=unknown RepID=UPI0003CE6D8B rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ61768.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_2107_6
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4574..5407)
DNA (834bp) protein (278aa)
UPI0003CFF1D2 related cluster n=1 Tax=unknown RepID=UPI0003CFF1D2 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ72559.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
Binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2107_7
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5418..6317)
DNA (900bp) protein (300aa)
ABC transporter permease n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H5Y3_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:ESZ08767.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
Binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2107_8
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6429..7823)
DNA (1395bp) protein (465aa)
UPI0003CE4677 related cluster n=2 Tax=unknown RepID=UPI0003CE4677 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY02815.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_2107_9
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7981..8658
DNA (678bp) protein (226aa)
UPI0003CEEC90 related cluster n=1 Tax=unknown RepID=UPI0003CEEC90 rbh
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000313|EMBL:ESX86681.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2107_10
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8658..10115
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GP85_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ32607.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
xylulokinase
SCNpilot_expt_1000_bf_scaffold_2107_11
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10127..11422
DNA (1296bp) protein (432aa)
putative glycerol 1-phosphate dehydrogenase protein (L-arabinose utilization protein) protein (EC:1.1.1.261); K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261]
UPI0003CF6E3C related cluster n=1 Tax=unknown RepID=UPI0003CF6E3C rbh
Glycerol 1-phosphate dehydrogenase (L-arabinose utilization protein) protein {ECO:0000313|EMBL:ESW68657.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
SCNpilot_expt_1000_bf_scaffold_2107_12
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11709..12209
DNA (501bp) protein (167aa)
UPI0003D04903 related cluster n=1 Tax=unknown RepID=UPI0003D04903
HAD family hydrolase {ECO:0000313|EMBL:ESZ52710.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
HAD family hydrolase; K07024
SCNpilot_expt_1000_bf_scaffold_2107_13
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12425..12979
DNA (555bp) protein (185aa)
UPI0003CF1620 related cluster n=1 Tax=unknown RepID=UPI0003CF1620 rbh
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:ESX03087.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2107_14
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12990..13781)
DNA (792bp) protein (264aa)
peptide ABC transporter ATPase n=1 Tax=Rhizobium loti RepID=UPI000360FB40 rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:ESY75110.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
ABC transporter; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_2107_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13778..14584)
DNA (807bp) protein (269aa)
ABC transporter, ATP-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4M2_9RHIZ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHH13294.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_2107_16
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14581..15411)
DNA (831bp) protein (277aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KID7_MESAW rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AGB44164.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_2107_17
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15408..16391)
DNA (984bp) protein (328aa)
UPI0003CF1606 related cluster n=1 Tax=unknown RepID=UPI0003CF1606 rbh
ABC transporter permease {ECO:0000313|EMBL:ESY70487.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2107_18
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16665..17741)
DNA (1077bp) protein (359aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium loti RepID=UPI00037A22B9
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:AID32611.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC transporter oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Displaying 18 items

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