name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2320_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..509
|
Inositol 2-dehydrogenase {ECO:0000313|EMBL:CDX38406.1}; EC=1.1.1.18 {ECO:0000313|EMBL:CDX38406.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
oxidoreductase domain-containing protein (EC:1.1.1.18); K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Myo-inositol dehydrogenase (IdhA) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7B4_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2320_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
882..1676
|
UPI0003CE40BC related cluster n=1 Tax=unknown RepID=UPI0003CE40BC
rbh
Short chain dehydrogenase {ECO:0000313|EMBL:CDX37297.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1811..2077
|
Prevent-host-death protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLQ8_9RHIZ
Prevent-host-death protein {ECO:0000313|EMBL:ESX81113.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
prevent-host-death family protein
|
|
SCNpilot_expt_1000_bf_scaffold_2320_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2074..2496
|
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Ribonuclease VapC n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F0Y9_9RHIZ
twitching motility protein PilT; K07062
|
|
SCNpilot_expt_1000_bf_scaffold_2320_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2551..2793
|
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2320_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3021..4112
|
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7B6_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4180..4812)
|
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y310_MESOW
rbh
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:CDX19456.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
lysine exporter protein LysE/YggA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_8
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4941..5495
|
Helix-turn-helix type 11 domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y311_MESOW
Helix-turn-helix type 11 domain-containing protein
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:AEH84978.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_9
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5694..6875)
|
Complete genome; segment 4/17 n=1 Tax=Photorhabdus luminescens subsp. laumondii (strain TT01) RepID=Q7N832_PHOLL
rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:ETY80224.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_10
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7001..8500
|
Transcriptional regulator with HTH domain and aminotransferase domain containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T7G9_9RHIZ
rbh
Transcriptional regulator GntR family {ECO:0000313|EMBL:AJK50275.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
putative transcriptional regulatory protein,GntR family, with a PLP-dependent aminotransferase domain; putative signal peptide
|
|
SCNpilot_expt_1000_bf_scaffold_2320_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8523..9407)
|
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7B7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX21250.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
oxidoreductase domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_2320_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9404..9610)
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1G6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX37243.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2320_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9747..10028
|
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EW25_9RHIZ
Sugar isomerase (SIS) {ECO:0000313|EMBL:CDX38484.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sugar isomerase (SIS)
|
|
SCNpilot_expt_1000_bf_scaffold_2320_14
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10201..10602
|
UPI0003CED0B4 related cluster n=1 Tax=unknown RepID=UPI0003CED0B4
transcriptional regulator
Sugar isomerase {ECO:0000313|EMBL:ESY62178.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_15
unknown
|
Not on your lists |
10966..11604
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2320_16
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae
|
Not on your lists |
comp(11783..12127)
|
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TJE9_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF24015.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12457..12723
|
UPI0003D0670D related cluster n=1 Tax=unknown RepID=UPI0003D0670D
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:ESZ22662.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2320_18
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12777..14609
|
iolD protein; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037854EC
IolD protein {ECO:0000313|EMBL:AAK23280.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14766..15686
|
Rhizopine catabolism protein mocC n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EW41_9RHIZ
rbh
Rhizopine catabolism protein MocC {ECO:0000313|EMBL:CDX38475.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sugar phosphate isomerase/epimerase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_20
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15801..16013
|
UPI0003CF708D related cluster n=1 Tax=unknown RepID=UPI0003CF708D
Uncharacterized protein {ECO:0000313|EMBL:CDX37252.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2320_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16267..17079
|
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCF3_MESCW
rbh
5-deoxy-glucuronate isomerase {ECO:0000313|EMBL:CDX21264.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_22
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17305..18012
|
UPI0003CEF76A related cluster n=1 Tax=unknown RepID=UPI0003CEF76A
rbh
Phosphonate metabolism protein {ECO:0000313|EMBL:ESY62184.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
phosphonate metabolism protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18044..19183
|
Phosphonate metabolism protein PhnM n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7C5_9RHIZ
rbh
Carbon-phosphorus lyase complex subunit {ECO:0000313|EMBL:CDX37258.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphonate metabolism protein PhnM
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19180..19806
|
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; K05774 ribose 1,5-bisphosphokinase [EC:2.7.4.23]
rbh
UPI0003D055A1 related cluster n=1 Tax=unknown RepID=UPI0003D055A1
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_25
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20174..20983
|
Extracellular solute-binding protein family 3 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y412_MESOW
rbh
family 3 extracellular solute-binding protein
rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:AEH84989.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_26
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21088..21753
|
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y413_MESOW
rbh
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEH84990.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_27
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21757..22449
|
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y414_MESOW
rbh
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEH84991.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_28
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22465..23346)
|
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y415_MESOW
rbh
SMP-30/Gluconolaconase/LRE domain-containing protein
rbh
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:AEH84992.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2320_29
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23381..25333)
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000370E55E
rbh
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AID33839.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2320_30
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25343..26002)
|
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y418_MESOW
ABC transporter related protein {ECO:0000313|EMBL:AEH84995.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|