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SCNpilot_expt_1000_bf_scaffold_2362

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2362_1
unknown

Not on your lists

1..78
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2362_2
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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402..1637
DNA (1236bp) protein (412aa)
Predicted acyl-CoA transferase/carnitine dehydratase n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TGJ4_MYCSR
acyl-CoA transferase/carnitine dehydratase
Predicted acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:ADU01164.1}; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain Spyr1).;"
SCNpilot_expt_1000_bf_scaffold_2362_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1669..2778
DNA (1110bp) protein (370aa)
Monooxygenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY99_9BURK rbh
Monooxygenase {ECO:0000313|EMBL:ETR78287.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
monooxygenase
SCNpilot_expt_1000_bf_scaffold_2362_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2824..4257
DNA (1434bp) protein (478aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Putative aldehyde dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YND3_9SPHN
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:GAD50072.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
SCNpilot_expt_1000_bf_scaffold_2362_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4261..5289
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H4X5_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig184, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45383.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
inner-membrane translocator; K10440 ribose transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2362_6
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5324..6355
DNA (1032bp) protein (344aa)
ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262715E
Uncharacterized protein {ECO:0000313|EMBL:ESZ26576.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_2362_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6441..8558
DNA (2118bp) protein (706aa)
Simple sugar transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQ23_9BRAD rbh
Simple sugar transport system permease {ECO:0000313|EMBL:ERF84854.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2362_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8566..9624
DNA (1059bp) protein (353aa)
Strictosidine synthase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNP6_VEREI
Uncharacterized protein {ECO:0000313|EMBL:GAN76766.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
strictosidine synthase
SCNpilot_expt_1000_bf_scaffold_2362_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9624..11126
DNA (1503bp) protein (501aa)
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035D570A rbh
Ribose transport system ATP-binding protein {ECO:0000313|EMBL:ERF84856.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_expt_1000_bf_scaffold_2362_10
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11259..12083
DNA (825bp) protein (275aa)
Transcriptional regulator, IclR family n=1 Tax=Burkholderia xenovorans (strain LB400) PF5_BURXL">RepID=Q13PF5_BURXL
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABE34034.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_expt_1000_bf_scaffold_2362_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12114..12323
DNA (210bp) protein (70aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
acyl-CoA dehydrogenase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F4A17A
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EKE75549.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_2362_12
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12320..13273
DNA (954bp) protein (318aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Citreicella sp. 357 RepID=I1AYL4_9RHOB
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIE51585.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2362_13
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13423..14424
DNA (1002bp) protein (334aa)
ABC transporter permease (EC:3.6.3.17); K02057 simple sugar transport system permease protein
Inner-membrane translocator n=1 Tax=Nitratireductor indicus C115 RepID=K2N2I3_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KGF70910.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_expt_1000_bf_scaffold_2362_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14472..15488
DNA (1017bp) protein (339aa)
ABC transporter substrate-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PKK5_9RHIZ rbh
ABC transporter ribose permease {ECO:0000313|EMBL:GAN77431.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter substrate-binding protein; K02058 simple sugar transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_2362_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15553..17676
DNA (2124bp) protein (708aa)
ABC transporter (EC:3.6.3.17 4.3.3.2); K02057 simple sugar transport system permease protein rbh
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2P2P7_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EKF41601.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_2362_16
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17673..18764
DNA (1092bp) protein (364aa)
Putative enzyme n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HVE2_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:ETM67453.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2362_17
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18764..20254
DNA (1491bp) protein (497aa)
ribose ABC transporter ATP-binding protein (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036C9A82 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF70906.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_expt_1000_bf_scaffold_2362_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20324..21571
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N152_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE29997.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_expt_1000_bf_scaffold_2362_19
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21783..22556
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVK6_PUSST rbh
enoyl-CoA hydratase/isomerase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEC21212.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_expt_1000_bf_scaffold_2362_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22603..23712
DNA (1110bp) protein (370aa)
Monooxygenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY99_9BURK
Monooxygenase {ECO:0000313|EMBL:ETR78287.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
2-nitropropane dioxygenase
SCNpilot_expt_1000_bf_scaffold_2362_21
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23733..24017
DNA (285bp) protein (95aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Putative aldehyde dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YND3_9SPHN
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:GAD50072.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
SCNpilot_expt_1000_bf_scaffold_2362_22
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24166..25212
DNA (1047bp) protein (349aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Putative aldehyde dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YND3_9SPHN
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJR61762.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
SCNpilot_expt_1000_bf_scaffold_2362_23
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25433..26182
DNA (750bp) protein (250aa)
Transcriptional regulator, IclR family n=1 Tax=Burkholderia xenovorans (strain LB400) PF5_BURXL">RepID=Q13PF5_BURXL
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABE34034.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_expt_1000_bf_scaffold_2362_24
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26392..27372
DNA (981bp) protein (327aa)
UPI0003CF558A related cluster n=1 Tax=unknown RepID=UPI0003CF558A rbh
Putative transcriptional regulator {ECO:0000313|EMBL:CDX21705.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2362_25
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27410..27850)
DNA (441bp) protein (147aa)
AsnC family transcriptional regulator n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FYA2_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:CDX41545.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2362_26
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27982..28914
DNA (933bp) protein (311aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
arginase; K01476 arginase [EC:3.5.3.1] rbh
UPI0003CF6F90 related cluster n=1 Tax=unknown RepID=UPI0003CF6F90 rbh
SCNpilot_expt_1000_bf_scaffold_2362_27
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28917..30011
DNA (1095bp) protein (365aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:CDX26085.1}; EC=4.3.1.12 {ECO:0000313|EMBL:CDX26085.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] rbh
UPI0003CDE5E3 related cluster n=1 Tax=unknown RepID=UPI0003CDE5E3 rbh
SCNpilot_expt_1000_bf_scaffold_2362_28
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(30117..30893)
DNA (777bp) protein (259aa)
LuxR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GFH0_9RHIZ rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:ESX57960.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
LuxR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2362_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31010..33115
DNA (2106bp) protein (702aa)
Acetone carboxylase beta subunit {ECO:0000313|EMBL:CDX16354.1}; EC=6.4.1.6 {ECO:0000313|EMBL:CDX16354.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
5-oxoprolinase n=1 Tax=Rhizobium loti RepID=UPI00037ADBF1 rbh
hydantoin utilization protein A rbh
SCNpilot_expt_1000_bf_scaffold_2362_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33130..35325
DNA (2196bp) protein (732aa)
Hydantoin utilization protein B n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98C94_RHILO rbh
Hydantoin utilization protein B {ECO:0000313|EMBL:CDX41922.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hydantoin utilization protein B rbh
Displaying items 1-30 of 34 in total

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