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SCNpilot_expt_1000_bf_scaffold_2381

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2381_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1693
DNA (1692bp) protein (564aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB32_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2381_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1921..2592)
DNA (672bp) protein (224aa)
UPI0003CF5B1C related cluster n=1 Tax=unknown RepID=UPI0003CF5B1C rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY73134.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2381_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2923..3675
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000360F94E
Uncharacterized protein {ECO:0000313|EMBL:AID33334.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2381_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4135..4515
DNA (381bp) protein (127aa)
UPI0003CFCF2E related cluster n=1 Tax=unknown RepID=UPI0003CFCF2E
Uncharacterized protein {ECO:0000313|EMBL:ESZ06255.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2381_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4502..5191)
DNA (690bp) protein (230aa)
Phosphinothricin N-acetyltransferase {ECO:0000313|EMBL:CDX30367.1}; EC=2.3.1.183 {ECO:0000313|EMBL:CDX30367.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
Phosphinotricin acetyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB36_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2381_6
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5310..6089)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TIT2_MESCW rbh
hypothetical protein; K06890 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV10128.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2381_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6322..8952)
DNA (2631bp) protein (877aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YB77_MESOW rbh
Permease family protein {ECO:0000313|EMBL:AID33340.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2381_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8957..9652)
DNA (696bp) protein (232aa)
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THY1_MESCW rbh
ABC transporter; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADV10126.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2381_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9717..10385
DNA (669bp) protein (223aa)
UPI0003CFC8F9 related cluster n=1 Tax=unknown RepID=UPI0003CFC8F9 rbh
Hydrolase GDSL {ECO:0000313|EMBL:ESZ06250.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
G-D-S-L family lipolytic protein rbh
SCNpilot_expt_1000_bf_scaffold_2381_10
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10509..11093
DNA (585bp) protein (195aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
UPI0003CF8368 related cluster n=1 Tax=unknown RepID=UPI0003CF8368
SCNpilot_expt_1000_bf_scaffold_2381_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11160..11663)
DNA (504bp) protein (168aa)
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDX40254.1}; EC=3.1.3.2 {ECO:0000313|EMBL:CDX40254.1};; EC=3.1.3.48 {ECO:0000313|EMBL:CDX40254.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
UPI0003CE9F63 related cluster n=1 Tax=unknown RepID=UPI0003CE9F63
SCNpilot_expt_1000_bf_scaffold_2381_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11838..12131
DNA (294bp) protein (98aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
pterin-4a-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB43_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2381_13
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12272..12634
DNA (363bp) protein (121aa)
UPI0003D04545 related cluster n=1 Tax=unknown RepID=UPI0003D04545
Uncharacterized protein {ECO:0000313|EMBL:ESZ00998.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2381_14
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12954..13520
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB45_9RHIZ rbh
Signal peptide protein {ECO:0000313|EMBL:ESW77708.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
invasion associated locus B family protein rbh
SCNpilot_expt_1000_bf_scaffold_2381_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13678..15006
DNA (1329bp) protein (443aa)
diguanylate cyclase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0D0A
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABS69638.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_2381_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15064..16377)
DNA (1314bp) protein (438aa)
Chloride channel protein EriC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHC6_MESAW rbh
chloride channel protein EriC rbh
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:CDX21720.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_expt_1000_bf_scaffold_2381_17
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16559..16858)
DNA (300bp) protein (100aa)
UPI0003CEDC08 related cluster n=1 Tax=unknown RepID=UPI0003CEDC08
Uncharacterized protein {ECO:0000313|EMBL:ESY90109.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2381_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17197..18636
DNA (1440bp) protein (480aa)
Efflux transporter n=1 Tax=Rhizobium loti RepID=M5AMT8_RHILI rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDX41715.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
drug resistance transporter, EmrB/QacA subfamily rbh
SCNpilot_expt_1000_bf_scaffold_2381_19
unknown

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comp(18614..18943)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2381_20
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19113..19607
DNA (495bp) protein (165aa)
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=5
UPI0003CEAB3F related cluster n=1 Tax=unknown RepID=UPI0003CEAB3F
Displaying 20 items

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