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SCNpilot_expt_1000_bf_scaffold_2387

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2387_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..890
DNA (888bp) protein (296aa)
Putative electron transfer flavoprotein dehydrogenases {ECO:0000313|EMBL:CDX60249.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CDX60249.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
electron transfer flavoprotein-ubiquinone oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00036B04FA
SCNpilot_expt_1000_bf_scaffold_2387_2
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1035..1655
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EN77_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05608.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2387_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1648..2445)
DNA (798bp) protein (266aa)
ABC transporter-like protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000363ABE7 rbh
ABC transporter related {ECO:0000313|EMBL:ACL57692.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_2387_4
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2445..3500)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000382F143 rbh
ABC transporter permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ACB82406.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_expt_1000_bf_scaffold_2387_5
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3513..4562)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003788975 rbh
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
Periplasmic binding protein {ECO:0000313|EMBL:ACL57690.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_2387_6
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4794..6971
DNA (2178bp) protein (726aa)
TonB-dependent receptor n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L333_METC4 rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACK86241.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
SCNpilot_expt_1000_bf_scaffold_2387_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7008..7889
DNA (882bp) protein (294aa)
TonB-system energizer ExbB n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK16_MESCW
tonB-system energizer ExbB; K03561 biopolymer transport protein ExbB
TonB-system energizer ExbB {ECO:0000313|EMBL:ADV10273.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2387_8
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7920..8360
DNA (441bp) protein (147aa)
TonB system transport protein ExbD n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2B0_AGRVS
exbD; TonB system transport protein ExbD; K03559 biopolymer transport protein ExbD
TonB system transport protein ExbD {ECO:0000313|EMBL:ACM39008.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_1000_bf_scaffold_2387_9
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8357..9496
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GE67_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ERP96530.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_expt_1000_bf_scaffold_2387_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9531..9926)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C178_RHILT
Uncharacterized protein {ECO:0000313|EMBL:CDN52452.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2387_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10034..11041)
DNA (1008bp) protein (336aa)
UPI0003CDF93E related cluster n=1 Tax=unknown RepID=UPI0003CDF93E rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX18897.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2387_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11263..12765)
DNA (1503bp) protein (501aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CE49E3 related cluster n=1 Tax=unknown RepID=UPI0003CE49E3 rbh
AMP nucleosidase rbh
SCNpilot_expt_1000_bf_scaffold_2387_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12840..13034)
DNA (195bp) protein (65aa)
UPI0003CE386F related cluster n=1 Tax=unknown RepID=UPI0003CE386F
Uncharacterized protein {ECO:0000313|EMBL:ESY71437.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2387_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13067..13219)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FND0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX18905.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2387_15
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13600..14922
DNA (1323bp) protein (441aa)
UPI0003CECE02 related cluster n=1 Tax=unknown RepID=UPI0003CECE02 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY88150.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
cytochrome P450 family protein
SCNpilot_expt_1000_bf_scaffold_2387_16
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14964..15884
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036F7F85 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY78884.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
putative glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_2387_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16049..16390)
DNA (342bp) protein (114aa)
UPI0003D00233 related cluster n=1 Tax=unknown RepID=UPI0003D00233
Uncharacterized protein {ECO:0000313|EMBL:CDX33475.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2387_18
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16825..17091
DNA (267bp) protein (89aa)
UPI0003CE8548 related cluster n=1 Tax=unknown RepID=UPI0003CE8548
Uncharacterized protein {ECO:0000313|EMBL:ESW65175.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
Sel1 domain-containing protein repeat-containing protein; K07126
SCNpilot_expt_1000_bf_scaffold_2387_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17459..17749
DNA (291bp) protein (97aa)
Extracellular ligand-binding receptor n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7F2_MESOW
Leucine/isoleucine/valine transporter subunit periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CDX60267.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Displaying 19 items

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