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SCNpilot_expt_1000_bf_scaffold_2432

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2432_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..320
DNA (318bp) protein (106aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFK2_MESAW
putative DNA modification/repair radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:CDX41054.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_expt_1000_bf_scaffold_2432_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

301..954
DNA (654bp) protein (218aa)
UPI0003CE76CF related cluster n=1 Tax=unknown RepID=UPI0003CE76CF
Radical SAM domain protein {ECO:0000313|EMBL:CDX41054.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
putative DNA modification/repair radical SAM protein
SCNpilot_expt_1000_bf_scaffold_2432_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

957..2402
DNA (1446bp) protein (482aa)
DNA polymerase n=1 Tax=Rhizobium loti RepID=UPI000369F52F rbh
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:CDX60693.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
uracil-DNA glycosylase, family 4 rbh
SCNpilot_expt_1000_bf_scaffold_2432_4
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2684..3943)
DNA (1260bp) protein (420aa)
Putative hydroxypyruvate reductase {ECO:0000313|EMBL:CDX37858.1}; EC=1.1.1.81 {ECO:0000313|EMBL:CDX37858.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] rbh
TtuD3 hydroxypyruvate reductase n=1 Tax=Rhizobium loti RepID=UPI000364318A rbh
SCNpilot_expt_1000_bf_scaffold_2432_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3940..4443)
DNA (504bp) protein (168aa)
UPF0303 protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EH25_9RHIZ rbh
UPF0303 protein MPLSOD_310035 {ECO:0000256|HAMAP-Rule:MF_00761}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2432_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4513..5826)
DNA (1314bp) protein (438aa)
guanine deaminase; K01487 guanine deaminase [EC:3.5.4.3] rbh
Guanine deaminase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CH9_RHILO rbh
Guanine deaminase {ECO:0000313|EMBL:BAB51642.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_2432_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5828..6850)
DNA (1023bp) protein (341aa)
Mlr5140 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CI0_RHILO
hypothetical protein
Mlr5140 protein {ECO:0000313|EMBL:BAB51641.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_2432_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7336..8304
DNA (969bp) protein (323aa)
LysR substrate-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAB7_MESCW rbh
Transcriptional regulator {ECO:0000313|EMBL:CDX12120.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2432_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8364..9326
DNA (963bp) protein (321aa)
Nitrilotriacetate monooxygenase component A n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA72_9RHIZ rbh
Nitrilotriacetate monooxygenase component A {ECO:0000313|EMBL:EHH11385.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
nitrilotriacetate monooxygenase component A rbh
SCNpilot_expt_1000_bf_scaffold_2432_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9323..10582
DNA (1260bp) protein (420aa)
Nitrilotriacetate monooxygenase component A n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CI3_RHILO rbh
Putative monooxygenase YxeK {ECO:0000313|EMBL:CDX12145.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
nitrilotriacetate monooxygenase component A rbh
SCNpilot_expt_1000_bf_scaffold_2432_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10627..11463)
DNA (837bp) protein (279aa)
Phenazine biosynthesis family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA70_9RHIZ rbh
Phenazine biosynthesis family protein {ECO:0000313|EMBL:CDX37880.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phenazine biosynthesis protein, putative rbh
SCNpilot_expt_1000_bf_scaffold_2432_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11698..12186
DNA (489bp) protein (163aa)
DNA starvation/stationary phase protection protein Dps n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA69_9RHIZ rbh
Fe-binding and storage protein {ECO:0000313|EMBL:CDX37883.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
DNA protection during starvation protein; K04047 starvation-inducible DNA-binding protein
SCNpilot_expt_1000_bf_scaffold_2432_13
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12264..13277)
DNA (1014bp) protein (338aa)
Xanthine dehydrogenase accessory protein XdhC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KC27_MESAW rbh
xanthine dehydrogenase accessory protein XdhC rbh
Xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:AGB42837.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_2432_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13381..15738)
DNA (2358bp) protein (786aa)
Xanthine dehydrogenase, molybdopterin binding subunit {ECO:0000313|EMBL:CDX26828.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CDX26828.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CE0764 related cluster n=1 Tax=unknown RepID=UPI0003CE0764 rbh
xanthine dehydrogenase, molybdopterin binding subunit rbh
SCNpilot_expt_1000_bf_scaffold_2432_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15738..17621)
DNA (1884bp) protein (628aa)
xanthine dehydrogenase, small subunit; K13481 xanthine dehydrogenase small subunit [EC:1.17.1.4] rbh
FAD-binding molybdopterin dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000361EBF7 rbh
Xanthine dehydrogenase XdhA {ECO:0000313|EMBL:CDX41127.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_expt_1000_bf_scaffold_2432_16
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17867..19213
DNA (1347bp) protein (449aa)
urate catabolism protein (EC:3.5.1.41) rbh
Urate catabolism protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA64_9RHIZ rbh
Urate catabolism protein {ECO:0000313|EMBL:CDX37898.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_expt_1000_bf_scaffold_2432_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19273..20127
DNA (855bp) protein (285aa)
allantoin catabolism protein; K14977 ureidoglycine aminohydrolase [EC:3.5.3.-] rbh
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036C9702 rbh
Allantoin catabolism protein {ECO:0000313|EMBL:ADV09546.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2432_18
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20124..20630
DNA (507bp) protein (169aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ureidoglycolate hydrolase (EC:3.5.3.19); K01483 ureidoglycolate hydrolase [EC:3.5.3.19]
UPI0003CE03EC related cluster n=1 Tax=unknown RepID=UPI0003CE03EC
SCNpilot_expt_1000_bf_scaffold_2432_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20630..21223
DNA (594bp) protein (198aa)
cytidine deaminase n=1 Tax=Rhizobium loti RepID=UPI00037A5FDD rbh
Cytidine and deoxycytidylate deaminase zinc-binding region family protein {ECO:0000313|EMBL:AID33973.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
CMP/dCMP deaminase zinc-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_2432_20
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21361..22137
DNA (777bp) protein (259aa)
Hydrolase CocE/NonD family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y1M8_MESOW
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:CDX26845.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hydrolase CocE/NonD family protein; K06978
SCNpilot_expt_1000_bf_scaffold_2432_21
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22134..23330
DNA (1197bp) protein (399aa)
Peptidase S15 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F159_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX41148.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
glutaryl 7-ACA acylase; K06978 rbh
SCNpilot_expt_1000_bf_scaffold_2432_22
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23485..25074
DNA (1590bp) protein (530aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EU51_9RHIZ rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CDX41151.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
family 5 extracellular solute-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_2432_23
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25172..25327
DNA (156bp) protein (52aa)
UPI0003CFF156 related cluster n=1 Tax=unknown RepID=UPI0003CFF156
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADV09551.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying 23 items

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