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SCNpilot_expt_1000_bf_scaffold_2606

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2606_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..452)
DNA (450bp) protein (150aa)
UPI0003CE362F related cluster n=1 Tax=unknown RepID=UPI0003CE362F
Uncharacterized protein {ECO:0000313|EMBL:CDX28051.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2606_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

605..1057
DNA (453bp) protein (151aa)
UPI0003CDEEAC related cluster n=1 Tax=unknown RepID=UPI0003CDEEAC
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:CDX12079.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
monoamine oxidase regulatory protein
SCNpilot_expt_1000_bf_scaffold_2606_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1061..1942
DNA (882bp) protein (294aa)
Citryl-CoA lyase (EC:4.1.3.34); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
UPI0003CE1230 related cluster n=1 Tax=unknown RepID=UPI0003CE1230 rbh
Citryl-CoA lyase {ECO:0000313|EMBL:CDX24562.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_2606_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2228..2653)
DNA (426bp) protein (142aa)
Nitroreductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ER84_9RHIZ
Nitroreductase {ECO:0000313|EMBL:CDX24559.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2606_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2808..3773
DNA (966bp) protein (322aa)
UPI0003CFEEE2 related cluster n=1 Tax=unknown RepID=UPI0003CFEEE2 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX12090.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2606_6
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3792..4733)
DNA (942bp) protein (314aa)
glycerol acyltransferase n=1 Tax=Rhizobium loti RepID=UPI00036762D6 rbh
phospholipid/glycerol acyltransferase rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADV13312.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2606_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..6786)
DNA (1968bp) protein (656aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
Threonine--tRNA ligase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y851_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2606_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6964..7773)
DNA (810bp) protein (270aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Beta-lactamase class D n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KM19_MESAW rbh
beta-lactamase class D rbh
SCNpilot_expt_1000_bf_scaffold_2606_9
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8222..8620)
DNA (399bp) protein (133aa)
UPI0003CE690E related cluster n=1 Tax=unknown RepID=UPI0003CE690E
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2606_10
unknown

Not on your lists

comp(8667..8816)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2606_11
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8910..9800
DNA (891bp) protein (297aa)
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A0EEF rbh
Transcriptional regulator {ECO:0000313|EMBL:ESZ16999.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2606_12
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9838..10650)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H5S4_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM67677.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2606_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10820..11539
DNA (720bp) protein (240aa)
PREDICTED: sulfate/thiosulfate import ATP-binding protein CysA-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15043
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX59501.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
high-affinity branched-chain amino acid transport ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_2606_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11581..12735
DNA (1155bp) protein (385aa)
Putative Branched-chain amino acid ABC transporter, periplasmic binding protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FC41_9RHIZ
Putative Branched-chain amino acid ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:CDX20876.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_2606_15
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12795..13592
DNA (798bp) protein (266aa)
ABC transporter ATP-binding protein n=1 Tax=Ruegeria conchae RepID=UPI0002379654
high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
High-affinity branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:AEI95155.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
SCNpilot_expt_1000_bf_scaffold_2606_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13580..13939
DNA (360bp) protein (120aa)
Leucine/isoleucine/valine transporter subunit membrane component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEN1_9RHIZ
Branched-chain amino acid ABC transporter,permease protein {ECO:0000313|EMBL:CCV07770.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Displaying 16 items

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