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SCNpilot_expt_1000_bf_scaffold_2626

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2626_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
Protein GrpE n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCN8_MESCW
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2626_2
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

633..1661
DNA (1029bp) protein (343aa)
UPI0003CE356F related cluster n=1 Tax=unknown RepID=UPI0003CE356F rbh
Fatty acid desaturase {ECO:0000313|EMBL:ESY99310.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
fatty acid desaturase rbh
SCNpilot_expt_1000_bf_scaffold_2626_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1720..2670
DNA (951bp) protein (317aa)
hemH; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDU3_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2626_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2725..3345)
DNA (621bp) protein (207aa)
intracellular protease, PfpI family; K05520 protease I [EC:3.2.-.-] rbh
Intracellular protease, PfpI family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5J9_MESOW rbh
Glutamine amidotransferase {ECO:0000313|EMBL:ESY70573.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_2626_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3582..4106)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMH8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX32632.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2626_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4245..5009)
DNA (765bp) protein (255aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8] rbh
Phosphoadenosine phosphosulfate reductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKP8_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2626_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4984..5469)
DNA (486bp) protein (162aa)
nitrite and sulfite reductase 4Fe-4S region; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G4P2_9RHIZ
Sulfite reductase hemoprotein subunit {ECO:0000313|EMBL:CDX24031.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_expt_1000_bf_scaffold_2626_8
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5519..6553
DNA (1035bp) protein (345aa)
Acetate permease (Fragment) n=1 Tax=Burkholderia sp. TJI49 RepID=F0G3D4_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
SCNpilot_expt_1000_bf_scaffold_2626_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6739..7044)
DNA (306bp) protein (102aa)
UPI0003D058DA related cluster n=1 Tax=unknown RepID=UPI0003D058DA
Uncharacterized protein {ECO:0000313|EMBL:ESZ22200.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2626_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7041..8489)
DNA (1449bp) protein (483aa)
uroporphyrin-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] rbh
Uroporphyrin-III C-methyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5J4_MESOW rbh
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AEH86250.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_2626_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9003..9449
DNA (447bp) protein (149aa)
Host attachment protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4X0_9RHIZ
Host attachment protein {ECO:0000313|EMBL:EHH13205.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
host attachment protein
SCNpilot_expt_1000_bf_scaffold_2626_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9658..11472
DNA (1815bp) protein (605aa)
Sodium/hydrogen exchanger n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCM7_MESCW rbh
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ADV10869.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2626_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11659..12408)
DNA (750bp) protein (250aa)
UPI0003CEF127 related cluster n=1 Tax=unknown RepID=UPI0003CEF127 rbh
Protein FixR {ECO:0000313|EMBL:CDX24011.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_2626_14
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12505..12843)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM59_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX80253.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_expt_1000_bf_scaffold_2626_15
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12848..15013)
DNA (2166bp) protein (722aa)
Penicillin-binding protein, 1A family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCM2_MESCW rbh
penicillin-binding protein rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ADV10864.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2626_16

Not on your lists

comp(15238..15906)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI000300A281
Uncharacterized protein {ECO:0000313|EMBL:KKN92889.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_2626_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16346..16729)
DNA (384bp) protein (128aa)
Mll3289 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GK1_RHILO
hypothetical protein
Mll3289 protein {ECO:0000313|EMBL:BAB50215.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_2626_18
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16980..17126)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4X8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13213.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2626_19
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17236..17490)
DNA (255bp) protein (85aa)
Transglycosylase-associated protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5I3_MESOW
transglycosylase-associated protein
Membrane protein {ECO:0000313|EMBL:ESY77757.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_expt_1000_bf_scaffold_2626_20
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17647..17847)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5I2_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH86238.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_2626_21
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17957..18580)
DNA (624bp) protein (208aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] rbh
3'-5' exonuclease n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Y1_9RHIZ rbh
3'-5' exonuclease {ECO:0000313|EMBL:EHH13216.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_2626_22
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18716..19309)
DNA (594bp) protein (198aa)
UPI0003D0273D related cluster n=1 Tax=unknown RepID=UPI0003D0273D
Uncharacterized protein {ECO:0000313|EMBL:ESZ24438.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
peptidase M20
SCNpilot_expt_1000_bf_scaffold_2626_23
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19303..20115)
DNA (813bp) protein (271aa)
UPI0003CF820C related cluster n=1 Tax=unknown RepID=UPI0003CF820C
Uncharacterized protein {ECO:0000313|EMBL:ESY96472.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
SCNpilot_expt_1000_bf_scaffold_2626_24
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20661..21677)
DNA (1017bp) protein (339aa)
Probable lactose transport ATP-binding protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0L0_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZQ13059.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
lacK; lactose ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_2626_25
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21688..22515)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003788BC7 rbh
ABC transporter permease {ECO:0000313|EMBL:AJY47306.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2626_26
unknown

Not on your lists

comp(22512..22589)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 26 items

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