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SCNpilot_expt_1000_bf_scaffold_2785

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2785_1
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..553
DNA (552bp) protein (184aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphapr
glycoprotease family metalloendopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
Protein kinase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GXD6_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2785_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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565..1533
DNA (969bp) protein (323aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] rbh
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJV4_MESCW rbh
SCNpilot_expt_1000_bf_scaffold_2785_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1595..1885
DNA (291bp) protein (97aa)
UPI0003CE685F related cluster n=1 Tax=unknown RepID=UPI0003CE685F
Uncharacterized protein {ECO:0000313|EMBL:ESY70691.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein; K09780 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2785_4
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2023..2448
DNA (426bp) protein (142aa)
PREDICTED: thymocyte nuclear protein 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C187C1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10209.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2785_5
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2445..3101
DNA (657bp) protein (219aa)
Methyltransferase-like protein 20 {ECO:0000313|EMBL:CDX42130.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDX42130.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Ribosomal L11 methyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YD33_MESOW rbh
ribosomal L11 methyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_2785_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3201..3617
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGD3_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX46450.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2785_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3625..4545)
DNA (921bp) protein (307aa)
UPI0003CFC964 related cluster n=1 Tax=unknown RepID=UPI0003CFC964 rbh
Transcriptional regulator {ECO:0000313|EMBL:ESZ26211.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2785_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4685..4930
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6U3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12503.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2785_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5007..5405
DNA (399bp) protein (133aa)
UPI0003CF5878 related cluster n=1 Tax=unknown RepID=UPI0003CF5878
Uncharacterized protein {ECO:0000313|EMBL:ESW90045.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2785_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5481..5996)
DNA (516bp) protein (172aa)
UPI0003D047F7 related cluster n=1 Tax=unknown RepID=UPI0003D047F7
ErfK/YbiS/YcfS/YnhG family protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ26213.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_expt_1000_bf_scaffold_2785_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6162..6845
DNA (684bp) protein (228aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FCQ0_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:ESX67281.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
response regulator receiver rbh
SCNpilot_expt_1000_bf_scaffold_2785_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6969..7424
DNA (456bp) protein (152aa)
UPI0003CDE0FC related cluster n=1 Tax=unknown RepID=UPI0003CDE0FC
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:AID33260.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2785_13
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7525..8331)
DNA (807bp) protein (269aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
UPI0003CE7A9B related cluster n=1 Tax=unknown RepID=UPI0003CE7A9B rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:ESX97829.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
SCNpilot_expt_1000_bf_scaffold_2785_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8526..9194)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6T8_9RHIZ rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2785_15
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9382..10062)
DNA (681bp) protein (227aa)
UPI0003CFE033 related cluster n=1 Tax=unknown RepID=UPI0003CFE033
Cell division protein FtsK {ECO:0000313|EMBL:ESZ18172.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_expt_1000_bf_scaffold_2785_16
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10020..11231)
DNA (1212bp) protein (404aa)
cell division protein FtsK n=1 Tax=Rhizobium loti RepID=UPI00037CC104
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:AID33264.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_expt_1000_bf_scaffold_2785_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11248..11577)
DNA (330bp) protein (110aa)
DNA translocase ftsK n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3C3_9RHIZ
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:ADV10197.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying 17 items

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