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SCNpilot_expt_1000_bf_scaffold_2791

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2791_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288..716
DNA (429bp) protein (143aa)
UPI0003CEDC0B related cluster n=1 Tax=unknown RepID=UPI0003CEDC0B
Uncharacterized protein {ECO:0000313|EMBL:ESW84561.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_expt_1000_bf_scaffold_2791_2
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

844..2265
DNA (1422bp) protein (474aa)
Multicopper oxidase, type 3 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETT1_9RHIZ rbh
Multicopper oxidase, type 3 {ECO:0000313|EMBL:CCV08369.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
multicopper oxidase, type 3
SCNpilot_expt_1000_bf_scaffold_2791_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2303..2743
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EVX6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX19923.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2791_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2788..3393
DNA (606bp) protein (202aa)
Thiol:disulfide interchange protein cycY n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F905_9RHIZ rbh
Thiol:disulfide interchange protein cycY {ECO:0000313|EMBL:CCV08366.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
cycY; cytochrome c-type biogenesis protein CycY (periplasmic thioredoxin)
SCNpilot_expt_1000_bf_scaffold_2791_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3390..3917
DNA (528bp) protein (176aa)
Putative thioredoxin protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWN5_9RHIZ
Putative thioredoxin protein {ECO:0000313|EMBL:CCV08365.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
thioredoxin protein
SCNpilot_expt_1000_bf_scaffold_2791_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3932..4261
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETS7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV08364.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2791_7
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4261..5013
DNA (753bp) protein (251aa)
Putative oxidoreductase protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWR7_9RHIZ rbh
Putative oxidoreductase protein {ECO:0000313|EMBL:CCV08363.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Protein SCO1 homolog, mitochondrial; K07152
SCNpilot_expt_1000_bf_scaffold_2791_8
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5059..5850
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EVX4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV08362.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2791_9
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5877..6611
DNA (735bp) protein (245aa)
cytochrome C biogenesis protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B40886
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGF71064.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
Cytochrome c biogenesis protein
SCNpilot_expt_1000_bf_scaffold_2791_10
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6631..7197
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEK5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX69995.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2791_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7272..8252
DNA (981bp) protein (327aa)
Mlr9641 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98P25_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX16788.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2791_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8347..8607
DNA (261bp) protein (87aa)
Putative membrane protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A4Q2_9CAUL
Putative membrane protein {ECO:0000313|EMBL:EJL26611.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein; K15977 putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_2791_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8745..9266
DNA (522bp) protein (174aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V466_9BRAD
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFI52746.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
FecI-like sigma-24 factor
SCNpilot_expt_1000_bf_scaffold_2791_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9263..9934
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V465_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52745.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2791_15
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10127..10396
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AG3_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65612.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_2791_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10861..11280)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4U0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEG10589.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_1000_bf_scaffold_2791_17
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11389..12468
DNA (1080bp) protein (360aa)
Sigma-70 region 4 type 2 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4T9_9RHIZ
Sigma-70 region 4 type 2 {ECO:0000313|EMBL:EHS52240.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
ParB domain-containing protein nuclease
SCNpilot_expt_1000_bf_scaffold_2791_18
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12425..13039
DNA (615bp) protein (205aa)
Uncharacterized protein YubM n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6J4_RHIFR
yubM; hypothetical protein
Uncharacterized protein YubM {ECO:0000313|EMBL:AFL51500.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_2791_19
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13110..13607
DNA (498bp) protein (166aa)
Uncharacterized protein n=3 Tax=Rhizobium meliloti RepID=M4MHM1_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK65150.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_expt_1000_bf_scaffold_2791_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13800..14990
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9ADG2_RHIFH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFL54931.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_2791_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14943..16037)
DNA (1095bp) protein (365aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN96335.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_2791_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16296..16742)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN96334.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_2791_23
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16956..17762)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X3L0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CDN96333.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_2791_24
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18235..19566
DNA (1332bp) protein (444aa)
Methylase/helicase n=2 Tax=Rhizobium fredii RepID=G9ADG8_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEO91241.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_1000_bf_scaffold_2791_25
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19572..20606
DNA (1035bp) protein (345aa)
DNA primase n=1 Tax=Rhizobium meliloti RepID=UPI0003133267 rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK74382.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_2791_26
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21157..21627
DNA (471bp) protein (157aa)
Transcriptional regulator syrB n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIW6_9RHIZ
Transcriptional regulator syrB {ECO:0000313|EMBL:CCV16355.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulator; K07497 putative transposase
SCNpilot_expt_1000_bf_scaffold_2791_27
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21652..21822)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMJ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16354.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
Displaying 27 items

View Taxonomy