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SCNpilot_expt_1000_bf_scaffold_2845

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2845_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339..1553)
DNA (1215bp) protein (405aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y963_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2845_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1602..2516)
DNA (915bp) protein (305aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037AE6D2 rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AID28770.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2845_3
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2605..3402
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7C9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12345.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2845_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3548..4825
DNA (1278bp) protein (426aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] rbh
UPI0003CE67FE related cluster n=1 Tax=unknown RepID=UPI0003CE67FE rbh
SCNpilot_expt_1000_bf_scaffold_2845_5
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4847..5980)
DNA (1134bp) protein (378aa)
UPI0003CE1A91 related cluster n=3 Tax=unknown RepID=UPI0003CE1A91 rbh
Muramidase {ECO:0000313|EMBL:ESX67009.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
glycoside hydrolase family protein rbh
SCNpilot_expt_1000_bf_scaffold_2845_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6218..7231
DNA (1014bp) protein (338aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
UPI0003CE4EC5 related cluster n=1 Tax=unknown RepID=UPI0003CE4EC5
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDX55434.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_2845_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7206..7961
DNA (756bp) protein (252aa)
Acyl-CoA dehydrogenase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y969_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDX55434.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2845_8
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8152..8907
DNA (756bp) protein (252aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ESZ29850.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ESZ29850.1};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003CFA3FF related cluster n=1 Tax=unknown RepID=UPI0003CFA3FF
enoyl-CoA hydratase/isomerase
SCNpilot_expt_1000_bf_scaffold_2845_9
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8938..9555)
DNA (618bp) protein (206aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] rbh
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8Z5_MESCW rbh
SCNpilot_expt_1000_bf_scaffold_2845_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9667..10056
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y976_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11745.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2845_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10157..11092
DNA (936bp) protein (312aa)
molecular chaperone DnaJ n=1 Tax=Rhizobium loti RepID=UPI00036FF14F rbh
molecular chaperone DnaJ rbh
Heat shock protein DnaJ {ECO:0000313|EMBL:BAB53555.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_2845_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11197..12015
DNA (819bp) protein (273aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF64_9RHIZ rbh
enoyl-(acyl-carrier-protein) reductase (NADH) rbh
SCNpilot_expt_1000_bf_scaffold_2845_13
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12074..12661
DNA (588bp) protein (196aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] rbh
UPI0003CEB5FE related cluster n=1 Tax=unknown RepID=UPI0003CEB5FE rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:ESX88946.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
SCNpilot_expt_1000_bf_scaffold_2845_14
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12745..13008)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV81_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV03631.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2845_15
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13290..14390
DNA (1101bp) protein (367aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] rbh
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
chorismate synthase n=1 Tax=Rhizobium loti RepID=UPI0003770FB8 rbh
SCNpilot_expt_1000_bf_scaffold_2845_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14509..15609
DNA (1101bp) protein (367aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHL5_9RHIZ rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase rbh
SCNpilot_expt_1000_bf_scaffold_2845_17
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15632..16162
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T834_MESCW
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDX34785.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
N-acetyltransferase GCN5
SCNpilot_expt_1000_bf_scaffold_2845_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16268..17215
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003702819 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX18313.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2845_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17216..17959)
DNA (744bp) protein (248aa)
UPI0003CDEA5A related cluster n=1 Tax=unknown RepID=UPI0003CDEA5A rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX42120.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
cob(II)yrinic acid a,c-diamide reductase rbh
SCNpilot_expt_1000_bf_scaffold_2845_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18345..19271
DNA (927bp) protein (309aa)
Acetoin utilization protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HD21_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX55464.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
histone deacetylase superfamily protein
SCNpilot_expt_1000_bf_scaffold_2845_21
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19275..19526
DNA (252bp) protein (84aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KTW3_MESAW
exodeoxyribonuclease VII, small subunit
SCNpilot_expt_1000_bf_scaffold_2845_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19580..19846
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHL9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX28844.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2845_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19856..20827
DNA (972bp) protein (324aa)
UPI0003D055F2 related cluster n=1 Tax=unknown RepID=UPI0003D055F2
Pirin-like protein CC_3178 {ECO:0000313|EMBL:CDX28845.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Pirin-related protein
SCNpilot_expt_1000_bf_scaffold_2845_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20852..22039
DNA (1188bp) protein (396aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
UPI0003CFEE74 related cluster n=1 Tax=unknown RepID=UPI0003CFEE74
Displaying 24 items

View Taxonomy