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SCNpilot_expt_1000_bf_scaffold_2980

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2980_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..298
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THE9_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV13595.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_2980_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

509..1024
DNA (516bp) protein (172aa)
Regulatory protein MarR n=3 Tax=Mesorhizobium RepID=E8THE8_MESCW rbh
MarR family transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAB54285.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_2980_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1449..2702
DNA (1254bp) protein (418aa)
UPI0003CF4410 related cluster n=1 Tax=unknown RepID=UPI0003CF4410 rbh
Amidase {ECO:0000313|EMBL:ESW92628.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2980_4
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2856..4265
DNA (1410bp) protein (470aa)
Sodium:proton antiporter n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H6R3_9RHIZ rbh
Sodium:proton antiporter {ECO:0000313|EMBL:ESZ07710.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family rbh
SCNpilot_expt_1000_bf_scaffold_2980_5
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4342..4488
DNA (147bp) protein (49aa)
UPI0003CE907B related cluster n=1 Tax=unknown RepID=UPI0003CE907B
Sodium:proton antiporter {ECO:0000313|EMBL:ESW92629.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
SCNpilot_expt_1000_bf_scaffold_2980_6
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5249..5989
DNA (741bp) protein (247aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G9V2_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2980_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6139..6705
DNA (567bp) protein (189aa)
UPI0003CFDCF2 related cluster n=1 Tax=unknown RepID=UPI0003CFDCF2
Uncharacterized protein {ECO:0000313|EMBL:ESZ27653.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2980_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6879..7364
DNA (486bp) protein (162aa)
NrdR family transcriptional regulator n=4 Tax=Mesorhizobium RepID=V7F400_9RHIZ rbh
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR rbh
SCNpilot_expt_1000_bf_scaffold_2980_9
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7366..8493
DNA (1128bp) protein (376aa)
riboflavin biosynthesis protein RibD; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FA84_9RHIZ rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_2980_10
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8493..9110
DNA (618bp) protein (206aa)
Riboflavin synthase, alpha subunit n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KN72_MESAW rbh
riboflavin synthase, alpha subunit rbh
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:AGB46862.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_2980_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..10085
DNA (495bp) protein (165aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8W9_9RHIZ rbh
6,7-dimethyl-8-ribityllumazine synthase rbh
SCNpilot_expt_1000_bf_scaffold_2980_12
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10082..10579
DNA (498bp) protein (166aa)
UPI0003CE0531 related cluster n=1 Tax=unknown RepID=UPI0003CE0531 rbh
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
transcription antitermination factor NusB; K03625 N utilization substance protein B rbh
SCNpilot_expt_1000_bf_scaffold_2980_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10576..11793
DNA (1218bp) protein (406aa)
MFS transporter n=1 Tax=Rhizobium loti RepID=UPI00037955D0 rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:ETA72594.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2980_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11993..12904
DNA (912bp) protein (304aa)
UPI0003D02890 related cluster n=1 Tax=unknown RepID=UPI0003D02890 rbh
ABC transporter {ECO:0000313|EMBL:ESZ20925.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) rbh
SCNpilot_expt_1000_bf_scaffold_2980_15
unknown

Not on your lists

comp(12879..13565)
DNA (687bp) protein (229aa)
transcription termination factor Rho n=1 Tax=Salinispora pacifica RepID=UPI000374564D
SCNpilot_expt_1000_bf_scaffold_2980_16
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14168..15043
DNA (876bp) protein (292aa)
UPI0003CEDCB3 related cluster n=1 Tax=unknown RepID=UPI0003CEDCB3 rbh
ATP-binding protein {ECO:0000313|EMBL:ESW69105.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
ABC-type proline/glycine betaine transport system, ATPase component rbh
SCNpilot_expt_1000_bf_scaffold_2980_17
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..15789
DNA (750bp) protein (250aa)
ABC transporter n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H4M4_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:ESW69104.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
ABC transporter permease; K05846 osmoprotectant transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2980_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16092..18221
DNA (2130bp) protein (710aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] rbh
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=HPPA_RHILO rbh
SCNpilot_expt_1000_bf_scaffold_2980_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18452..18868)
DNA (417bp) protein (139aa)
SmpA/OmlA domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7E6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX17108.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SmpA/OmlA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2980_20
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19097..19639
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQS6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV06448.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2980_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19651..20199
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FKS3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV13224.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2980_22
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20421..21467
DNA (1047bp) protein (349aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
Phosphate acyltransferase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KN61_MESAW rbh
fatty acid/phospholipid synthesis protein PlsX rbh
SCNpilot_expt_1000_bf_scaffold_2980_23
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22518..22841
DNA (324bp) protein (108aa)
Integration host factor subunit alpha n=6 Tax=Mesorhizobium RepID=G6Y8V6_9RHIZ
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
integration host factor subunit alpha; K04764 integration host factor subunit alpha
SCNpilot_expt_1000_bf_scaffold_2980_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23075..23506
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8V5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11827.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2980_25
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23592..24386)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8V2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11824.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2980_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24812..25648
DNA (837bp) protein (279aa)
S-formylglutathione hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D9C32 rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:CDX32913.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
S-formylglutathione hydrolase rbh
SCNpilot_expt_1000_bf_scaffold_2980_27
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25716..26954)
DNA (1239bp) protein (413aa)
nitrite reductase, copper-containing protein (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1]
nitrite reductase n=1 Tax=Kaistia granuli RepID=UPI000378704A
Nitrite reductase, copper-containing protein {ECO:0000313|EMBL:EKF19280.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_expt_1000_bf_scaffold_2980_28
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27459..27884)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003743EEF
NnrS {ECO:0000313|EMBL:EKF19281.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
NnrS; K07234 uncharacterized protein involved in response to NO
SCNpilot_expt_1000_bf_scaffold_2980_29
unknown

Not on your lists

27979..28653
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2980_30
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28658..29095)
DNA (438bp) protein (146aa)
Pseudoazurin n=2 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GTD0_9RHIZ
pseudoazurin
Pseudoazurin {ECO:0000313|EMBL:ESY81357.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
Displaying items 1-30 of 31 in total

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