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SCNpilot_expt_1000_bf_scaffold_8451

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8451_1
unknown

Not on your lists

comp(2..592)
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8451_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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958..2466
DNA (1509bp) protein (503aa)
sensor kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
Sensor kinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y992_9RHIZ
Sensor kinase {ECO:0000313|EMBL:EHH11598.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_8451_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2572..2877)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y746_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH88596.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_8451_4
unknown

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comp(2880..3068)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8451_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3182..3556
DNA (375bp) protein (125aa)
Glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y747_MESOW
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEH88597.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_8451_6
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3634..4164
DNA (531bp) protein (177aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhizobium loti RepID=UPI0003797AE3 rbh
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:AID30269.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8451_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4587..5132
DNA (546bp) protein (182aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KMF6_MESAW
Putative oxydoreductase, GMC family {ECO:0000313|EMBL:CDX38799.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
choline dehydrogenase-like flavoprotein
SCNpilot_expt_1000_bf_scaffold_8451_8
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..5709
DNA (618bp) protein (206aa)
UPI0003CDD293 related cluster n=1 Tax=unknown RepID=UPI0003CDD293
2-keto-gluconate dehydrogenase {ECO:0000313|EMBL:ESY81006.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
glucose-methanol-choline oxidoreductase
SCNpilot_expt_1000_bf_scaffold_8451_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5891..6286)
DNA (396bp) protein (132aa)
UPI0003D06385 related cluster n=1 Tax=unknown RepID=UPI0003D06385
Uncharacterized protein {ECO:0000313|EMBL:ESZ15092.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8451_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6593..7069
DNA (477bp) protein (159aa)
Urea ABC transporter, urea binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TB31_MESCW
Putative branched-chain amino acid ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CDX14573.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
urea ABC transporter urea binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_8451_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7012..7896
DNA (885bp) protein (295aa)
UPI0003CF5866 related cluster n=1 Tax=unknown RepID=UPI0003CF5866
Putative branched-chain amino acid ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CDX26255.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
urea ABC transporter urea binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_8451_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8032..9648
DNA (1617bp) protein (539aa)
Urea ABC transporter permease n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9A0_9RHIZ rbh
Urea ABC transporter permease {ECO:0000313|EMBL:CDX19645.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
urea ABC transporter, permease protein UrtB rbh
SCNpilot_expt_1000_bf_scaffold_8451_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9645..10748
DNA (1104bp) protein (368aa)
Urea ABC transporter, permease protein UrtC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNS0_MESAW rbh
Putative branched-chain amino acid ABC transporter (Permease protein) {ECO:0000313|EMBL:CDX14580.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
urea ABC transporter, permease protein UrtC rbh
SCNpilot_expt_1000_bf_scaffold_8451_14
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10852..11598
DNA (747bp) protein (249aa)
Putative branched-chain amino acid ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CDX26192.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDX26192.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UPI0003CEF102 related cluster n=1 Tax=unknown RepID=UPI0003CEF102 rbh
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_8451_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12007..12330
DNA (324bp) protein (108aa)
UPI0003CF7709 related cluster n=1 Tax=unknown RepID=UPI0003CF7709
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX19652.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
urea ABC transporter ATP-binding protein UrtE; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_8451_16
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12482..12754
DNA (273bp) protein (91aa)
UPI0003CEA6E2 related cluster n=1 Tax=unknown RepID=UPI0003CEA6E2
Uncharacterized protein {ECO:0000313|EMBL:ESY73045.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8451_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12836..13987)
DNA (1152bp) protein (384aa)
UPI0003CEBFB5 related cluster n=1 Tax=unknown RepID=UPI0003CEBFB5 rbh
Diguanylate cyclase {ECO:0000313|EMBL:ESY73044.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_8451_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14095..14898)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000362BC16 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX49582.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_8451_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14926..15396)
DNA (471bp) protein (157aa)
Putative acetyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F5C8_9RHIZ
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:CDX26082.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_8451_20
unknown

Not on your lists

comp(15393..15719)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8451_21
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15731..16144)
DNA (414bp) protein (138aa)
UPI0003CEE9CB related cluster n=1 Tax=unknown RepID=UPI0003CEE9CB
Uncharacterized protein {ECO:0000313|EMBL:CDX36563.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
crcB family protein
SCNpilot_expt_1000_bf_scaffold_8451_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16579..17067)
DNA (489bp) protein (163aa)
UPI0003CECB56 related cluster n=1 Tax=unknown RepID=UPI0003CECB56
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
excinuclease ABC, A subunit
SCNpilot_expt_1000_bf_scaffold_8451_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17064..19424)
DNA (2361bp) protein (787aa)
UvrABC system protein A n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9A8_9RHIZ
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
Displaying 23 items

View Taxonomy