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SCNpilot_expt_1000_bf_scaffold_1184

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1184_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1267
DNA (1266bp) protein (422aa)
serine protease; K01362 [EC:3.4.21.-]
Protease Do n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0I0_9RHIZ
Protease Do {ECO:0000313|EMBL:EHK53526.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_1184_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1458..2132
DNA (675bp) protein (225aa)
UPI0003D02B17 related cluster n=1 Tax=unknown RepID=UPI0003D02B17
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
XRE family transcriptional regulator {ECO:0000313|EMBL:ESZ18001.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_expt_1000_bf_scaffold_1184_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2134..3549
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Sensor protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EN66_9RHIZ
ATPase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1184_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3546..6515
DNA (2970bp) protein (990aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42]
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0I3_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_1184_5
unknown

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comp(6520..7515)
DNA (996bp) protein (332aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1184_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7613..8023)
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
ribonuclease n=1 Tax=Rhizobium meliloti RepID=UPI00036796CE
PilT domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1184_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8023..8286)
DNA (264bp) protein (88aa)
Rv0623 family protein transcription factor n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWK7_OCHA4
transcription factor
Rv0623 family protein transcription factor {ECO:0000313|EMBL:ABS13361.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_expt_1000_bf_scaffold_1184_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8368..10710)
DNA (2343bp) protein (781aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
multi-sensor signal transduction histidine kinase; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
Sensor protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7Y8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1184_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10942..13587)
DNA (2646bp) protein (882aa)
pepN; aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2]
Aminopeptidase N n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985F4_RHILO
Aminopeptidase N {ECO:0000313|EMBL:BAB54108.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1184_10
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13765..16071
DNA (2307bp) protein (769aa)
carbon monoxide dehydrogenase (EC:1.2.99.2); K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] rbh
UPI0003CE540B related cluster n=1 Tax=unknown RepID=UPI0003CE540B rbh
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:ESY80042.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_expt_1000_bf_scaffold_1184_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16068..17045
DNA (978bp) protein (326aa)
UPI0003CFCCFF related cluster n=1 Tax=unknown RepID=UPI0003CFCCFF rbh
hypothetical protein; K15270 S-adenosylmethionine uptake transporter rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV13971.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1184_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17051..17803)
DNA (753bp) protein (251aa)
UPI0003CEAB75 related cluster n=1 Tax=unknown RepID=UPI0003CEAB75 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX18867.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_1184_13
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17959..18804)
DNA (846bp) protein (282aa)
hypothetical protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] rbh
UPI0003CF3E90 related cluster n=1 Tax=unknown RepID=UPI0003CF3E90 rbh
DNA polymerase {ECO:0000313|EMBL:ESY59814.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
SCNpilot_expt_1000_bf_scaffold_1184_14
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18905..19216)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y8H5_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH89776.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1184_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19764..20573
DNA (810bp) protein (270aa)
Putative electron transfer flavoprotein dehydrogenases {ECO:0000313|EMBL:CDX41644.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CDX41644.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
electron transfer flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
Putative electron transfer flavoprotein dehydrogenases n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMN4_9RHIZ
Displaying 15 items

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