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SCNpilot_expt_1000_bf_scaffold_1331

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1331_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87..503)
DNA (417bp) protein (139aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBK5_MESCW
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADV10800.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1331_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(508..1374)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037DC2A7 rbh
Uncharacterized protein {ECO:0000313|EMBL:AID32608.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
TIM-barrel signal transduction protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_3
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1386..2582)
DNA (1197bp) protein (399aa)
UPI0003CF0DAB related cluster n=1 Tax=unknown RepID=UPI0003CF0DAB rbh
UPF0261 protein X755_03585 {ECO:0000256|HAMAP-Rule:MF_00677}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2758..3354
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FH68_9RHIZ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCV11424.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
TetR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_1331_5
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4186..4986
DNA (801bp) protein (267aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFN8_MESAW
ABC-type sugar transport system, periplasmic component
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY99236.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_expt_1000_bf_scaffold_1331_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5067..5960
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4L2_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX39317.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
permease component of ABC-type sugar transporter rbh
SCNpilot_expt_1000_bf_scaffold_1331_7
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6620..6889
DNA (270bp) protein (90aa)
ABC-type transporter, integral membrane subunit n=4 Tax=Rhizobium meliloti RepID=F6BWX2_SINMB
ABC transporter permease y4oR
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AGB44174.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1331_8
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7116..8195
DNA (1080bp) protein (360aa)
ABC transporter ATP-binding protein n=2 Tax=Mesorhizobium RepID=V7F711_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESX45723.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
ABC transporter rbh
SCNpilot_expt_1000_bf_scaffold_1331_9
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8195..9280
DNA (1086bp) protein (362aa)
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBL4_MESCW rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADV10809.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1331_10
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9306..10289)
DNA (984bp) protein (328aa)
Cupin n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FAW9_9RHIZ rbh
Cupin {ECO:0000313|EMBL:ESX64962.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_1331_11
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11333..11560
DNA (228bp) protein (76aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4C8_MESOW
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEH86182.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1331_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11602..12180)
DNA (579bp) protein (193aa)
Transcriptional regulator, repressor protein MphR(A) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4K4_9RHIZ rbh
Transcriptional regulator, repressor protein MphR(A) {ECO:0000313|EMBL:CDX39293.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator, repressor protein MphR(A)
SCNpilot_expt_1000_bf_scaffold_1331_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12207..12668)
DNA (462bp) protein (154aa)
Putative transcriptional regulator protein, TetR family n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A3Y6_RHIET
Putative transcriptional regulator protein, TetR family {ECO:0000313|EMBL:EGE60786.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_expt_1000_bf_scaffold_1331_14
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12773..13138
DNA (366bp) protein (122aa)
UPI0003CDDC5B related cluster n=1 Tax=unknown RepID=UPI0003CDDC5B
Uncharacterized protein {ECO:0000313|EMBL:CDX43960.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
short chain dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1331_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13207..13554)
DNA (348bp) protein (116aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EM52_9RHIZ
Glutathione-dependent formaldehyde-activating protein {ECO:0000313|EMBL:CDX43957.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1331_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14518..14988
DNA (471bp) protein (157aa)
Amidase {ECO:0000313|EMBL:EHH13273.1}; EC=3.5.1.4 {ECO:0000313|EMBL:EHH13273.1};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Amidase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4K1_9RHIZ
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
SCNpilot_expt_1000_bf_scaffold_1331_17
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15492..16469)
DNA (978bp) protein (326aa)
Glyoxylate reductase {ECO:0000313|EMBL:CDX43948.1}; EC=1.1.1.26 {ECO:0000313|EMBL:CDX43948.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
UPI0003CF5651 related cluster n=1 Tax=unknown RepID=UPI0003CF5651 rbh
SCNpilot_expt_1000_bf_scaffold_1331_18
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16724..17440)
DNA (717bp) protein (239aa)
UPI0003CE448E related cluster n=1 Tax=unknown RepID=UPI0003CE448E rbh
GntR domain protein {ECO:0000313|EMBL:CDX43945.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
GntR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_1331_19
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17443..18618)
DNA (1176bp) protein (392aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBM2_MESCW rbh
mandelate racemase/muconate lactonizing protein rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADV10817.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1331_20
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18775..19728)
DNA (954bp) protein (318aa)
D-Tagatose 3-epimerase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GE7_RHILO rbh
D-tagatose 3-epimerase rbh
D-Tagatose 3-epimerase {ECO:0000313|EMBL:BAB50269.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1331_21
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20065..21120
DNA (1056bp) protein (352aa)
UPI0003CFCBC0 related cluster n=1 Tax=unknown RepID=UPI0003CFCBC0 rbh
AP endonuclease {ECO:0000313|EMBL:ESZ24396.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_22
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21273..22460
DNA (1188bp) protein (396aa)
Uncharacterized oxidoreductase y4hM {ECO:0000313|EMBL:CDX43930.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDX43930.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UPI0003CF460B related cluster n=1 Tax=unknown RepID=UPI0003CF460B rbh
oxidoreductase domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_23
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22673..23524
DNA (852bp) protein (284aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFQ4_MESAW rbh
sugar phosphate isomerase/epimerase rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGB44187.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1331_24
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23575..24942)
DNA (1368bp) protein (456aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBM7_MESCW rbh
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein rbh
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADV10822.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1331_25
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24945..25901)
DNA (957bp) protein (319aa)
UPI0003CE8854 related cluster n=1 Tax=unknown RepID=UPI0003CE8854 rbh
Phosphonate ABC transporter permease {ECO:0000313|EMBL:ESY71247.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_26
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25958..26866)
DNA (909bp) protein (303aa)
Phosphonate ABC transporter substrate-binding protein n=3 Tax=Mesorhizobium RepID=V7F4H5_9RHIZ rbh
phosphonate ABC transporter periplasmic phosphonate binding protein; K02044 phosphonate transport system substrate-binding protein rbh
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY22624.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
SCNpilot_expt_1000_bf_scaffold_1331_27
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27062..27907)
DNA (846bp) protein (282aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
phosphonate ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI00036C1510 rbh
phosphonate ABC transporter, ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_28
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28031..28741)
DNA (711bp) protein (237aa)
Mlr3352 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GF6_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:AID32577.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_29
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28808..29440)
DNA (633bp) protein (211aa)
UPI0003CFDEC3 related cluster n=1 Tax=unknown RepID=UPI0003CFDEC3 rbh
Acetyltransferase {ECO:0000313|EMBL:ESZ24403.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
phosphonate metabolism protein rbh
SCNpilot_expt_1000_bf_scaffold_1331_30
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29437..30144)
DNA (708bp) protein (236aa)
Phosphonate C-P lyase system protein PhnL n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBN2_MESCW rbh
phosphonate C-P lyase system protein PhnL; K05780 putative phosphonate transport system ATP-binding protein rbh
Phosphonate C-P lyase system protein PhnL {ECO:0000313|EMBL:ADV10827.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying items 1-30 of 48 in total

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