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SCNpilot_expt_1000_bf_scaffold_1366

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1366_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..418
DNA (417bp) protein (139aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
alkylhydroperoxidase n=1 Tax=Rhizobium loti RepID=UPI00036E794C
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1366_2
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

518..880
DNA (363bp) protein (121aa)
UPI0003D01A67 related cluster n=1 Tax=unknown RepID=UPI0003D01A67
Uncharacterized protein {ECO:0000313|EMBL:ESZ68998.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1366_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

967..1281
DNA (315bp) protein (105aa)
UPI0003CE1CDB related cluster n=1 Tax=unknown RepID=UPI0003CE1CDB
Uncharacterized protein {ECO:0000313|EMBL:CDX37067.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1366_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1473..2099)
DNA (627bp) protein (209aa)
UPI0003CDFD72 related cluster n=1 Tax=unknown RepID=UPI0003CDFD72
Uncharacterized protein {ECO:0000313|EMBL:CDX16655.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1366_5
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2197..3240)
DNA (1044bp) protein (348aa)
aldehyde dehydrogenase; K00137 aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
UPI0003CFF304 related cluster n=1 Tax=unknown RepID=UPI0003CFF304
Medium chain aldehyde dehydrogenase {ECO:0000313|EMBL:CDX42783.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_expt_1000_bf_scaffold_1366_6
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3713..4528)
DNA (816bp) protein (272aa)
UPI0003CDE745 related cluster n=1 Tax=unknown RepID=UPI0003CDE745 rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ESY83493.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1366_7
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4518..5414)
DNA (897bp) protein (299aa)
ABC transporter permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BX8_RHILO rbh
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ESY66681.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_1366_8
Cronobacter universalis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5733..6485
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016AD465
Uncharacterized protein {ECO:0000313|EMBL:CCK17660.1}; TaxID=1074000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter universalis NCTC 9529.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1366_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6645..7799)
DNA (1155bp) protein (385aa)
ABC transporter, binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BY0_RHILO rbh
ABC transporter binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein rbh
ABC transporter, binding protein {ECO:0000313|EMBL:BAB51841.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1366_10
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8010..8921)
DNA (912bp) protein (304aa)
UPI0003CF6079 related cluster n=1 Tax=unknown RepID=UPI0003CF6079 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY66678.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_1366_11
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8987..9601)
DNA (615bp) protein (205aa)
SNARE associated Golgi protein-like protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4J3_MESOW rbh
hypothetical protein rbh
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEH87313.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1366_12
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9598..10197)
DNA (600bp) protein (200aa)
Mlr5374 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BY6_RHILO rbh
phospholipid N-methyltransferase rbh
Mlr5374 protein {ECO:0000313|EMBL:BAB51835.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1366_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10434..11108
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI000362291C rbh
two-component response regulator rbh
Two-component response regulator {ECO:0000313|EMBL:BAB51834.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1366_14
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11105..12478
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Histidine kinase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4J0_MESOW rbh
histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_1366_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12549..12998
DNA (450bp) protein (150aa)
UPI0003D0236A related cluster n=1 Tax=unknown RepID=UPI0003D0236A
Uncharacterized protein {ECO:0000313|EMBL:CDX37101.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1366_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12988..13884
DNA (897bp) protein (299aa)
Thioredoxin reductase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDP2_MESAW rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDX50520.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
thioredoxin reductase rbh
SCNpilot_expt_1000_bf_scaffold_1366_17
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13903..14667)
DNA (765bp) protein (255aa)
UPI0003CF65E5 related cluster n=1 Tax=unknown RepID=UPI0003CF65E5 rbh
DeoR family transcriptional regulator {ECO:0000313|EMBL:ESW87005.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor rbh
SCNpilot_expt_1000_bf_scaffold_1366_18
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14991..15980
DNA (990bp) protein (330aa)
Choline kinase n=3 Tax=Mesorhizobium RepID=V7FZ09_9RHIZ rbh
Choline kinase {ECO:0000313|EMBL:ESY52791.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
putative choline kinase involved in LPS biosynthesis rbh
SCNpilot_expt_1000_bf_scaffold_1366_19
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15977..18418
DNA (2442bp) protein (814aa)
Sarcosine dehydrogenase, mitochondrial {ECO:0000313|EMBL:CDX26316.1}; EC=1.5.8.3 {ECO:0000313|EMBL:CDX26316.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003D05C6A related cluster n=1 Tax=unknown RepID=UPI0003D05C6A rbh
FAD dependent oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_1366_20
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18425..19060)
DNA (636bp) protein (212aa)
Methyltransferase type 11 n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HPV3_9RHIZ rbh
Methyltransferase type 11 {ECO:0000313|EMBL:ESZ63568.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
methylase involved in ubiquinone/menaquinone biosynthesis rbh
SCNpilot_expt_1000_bf_scaffold_1366_21
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19159..20061
DNA (903bp) protein (301aa)
Mll5367 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BZ3_RHILO rbh
hypothetical protein rbh
Mll5367 protein {ECO:0000313|EMBL:BAB51828.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1366_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20078..20551)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035C28CF
Putative membrane protein {ECO:0000313|EMBL:CDX50511.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1366_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20794..21681)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBI3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX42805.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K15270 S-adenosylmethionine uptake transporter rbh
Displaying 23 items

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