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SCNpilot_expt_1000_bf_scaffold_1384

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1384_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(349..1329)
DNA (981bp) protein (327aa)
Transcriptional regulator, AraC family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPZ5_NOCSJ
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABL83880.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_expt_1000_bf_scaffold_1384_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1446..1727
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B8F0_RHILS
Uncharacterized protein {ECO:0000313|EMBL:CDX21593.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1384_3
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1848..2360
DNA (513bp) protein (171aa)
UPI0003CF6A0A related cluster n=1 Tax=unknown RepID=UPI0003CF6A0A
Uncharacterized protein {ECO:0000313|EMBL:CDX47056.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1384_4
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2482..2793)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F8H1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY85858.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_expt_1000_bf_scaffold_1384_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2883..3518)
DNA (636bp) protein (212aa)
UPI0003D009E5 related cluster n=1 Tax=unknown RepID=UPI0003D009E5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ18458.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1384_6
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3564..4814)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00037346CC rbh
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP19250.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1384_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4912..5721
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UHH8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN89708.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1384_8
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5714..5938
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PXH3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM76052.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1384_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6116..6871)
DNA (756bp) protein (252aa)
Probable stomatin n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98JI1_RHILO rbh
stomatin rbh
Probable stomatin {ECO:0000313|EMBL:BAB49184.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1384_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6879..8267)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBG1_MESOW rbh
hypothetical protein; K07403 membrane-bound serine protease (ClpP class) rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH87708.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1384_11
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8345..9166)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNC1_MESAW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB45598.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1384_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9237..9953)
DNA (717bp) protein (239aa)
Porin n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBG0_MESOW rbh
porin rbh
Porin {ECO:0000313|EMBL:AEH87707.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1384_13
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10153..11211)
DNA (1059bp) protein (353aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBT4_MESCW rbh
AraC type helix-turn-helix-domain containing protein rbh
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ADV12009.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1384_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11493..13154
DNA (1662bp) protein (554aa)
AMP-dependent synthetase and ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
AMP-dependent synthetase and ligase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7R0_9RHIZ rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHH12144.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_1384_15
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13325..14833
DNA (1509bp) protein (503aa)
AAA ATPase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBI5_MESOW rbh
AAA ATPase; K06915 rbh
AAA ATPase {ECO:0000313|EMBL:AEH87732.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1384_16
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14980..15945
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHF1_MESAW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB44762.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1384_17
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17374..18237
DNA (864bp) protein (288aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QIB0_9CAUL
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EGF91748.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
Outer membrane autotransporter barrel
Displaying 17 items

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