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SCNpilot_expt_1000_bf_scaffold_1455

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1455_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

446..871
DNA (426bp) protein (142aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GVE6_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDX42465.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1455_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1238..1414
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037CFB52
Uncharacterized protein {ECO:0000313|EMBL:AID33092.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1455_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1411..3567
DNA (2157bp) protein (719aa)
Phospholipase D/transphosphatidylase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGJ0_9RHIZ rbh
Phospholipase D/transphosphatidylase {ECO:0000313|EMBL:EHH09128.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
phospholipase D/transphosphatidylase rbh
SCNpilot_expt_1000_bf_scaffold_1455_4
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3605..4861)
DNA (1257bp) protein (419aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
UPI0003D05B16 related cluster n=1 Tax=unknown RepID=UPI0003D05B16 rbh
SCNpilot_expt_1000_bf_scaffold_1455_5
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4923..5480)
DNA (558bp) protein (186aa)
Nucleoside diphosphate kinase regulator, Rnk n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM01_MESCW
nucleoside diphosphate kinase regulator, Rnk
Nucleoside diphosphate kinase regulator, Rnk {ECO:0000313|EMBL:ADV10386.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1455_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5483..5899)
DNA (417bp) protein (139aa)
Transcription elongation factor n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KH53_MESAW
transcription elongation factor
Transcription elongation factor {ECO:0000313|EMBL:AGB43734.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1455_7
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6174..7244)
DNA (1071bp) protein (357aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] rbh
UPI0003CE1702 related cluster n=1 Tax=unknown RepID=UPI0003CE1702 rbh
SCNpilot_expt_1000_bf_scaffold_1455_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7474..7989)
DNA (516bp) protein (172aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
RNA pyrophosphohydrolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGI7_9RHIZ rbh
NTP pyrophosphohydrolase rbh
SCNpilot_expt_1000_bf_scaffold_1455_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8044..9222)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036538A8 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09124.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K09798 hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1455_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9375..10766)
DNA (1392bp) protein (464aa)
Carboxy-terminal-processing protease {ECO:0000313|EMBL:CDX45407.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDX45407.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
Carboxyl-terminal protease n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFI5_MESOW rbh
SCNpilot_expt_1000_bf_scaffold_1455_11
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10708..12009)
DNA (1302bp) protein (434aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI0003665A60 rbh
membrane-bound metallopeptidase rbh
Membrane-bound metallopeptidase {ECO:0000313|EMBL:AGB43729.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1455_12
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12118..12600)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
UPI0003CE234F related cluster n=1 Tax=unknown RepID=UPI0003CE234F
SCNpilot_expt_1000_bf_scaffold_1455_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12737..13114)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FK70_9RHIZ
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein; K09710 ribosome-associated protein
SCNpilot_expt_1000_bf_scaffold_1455_14
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13369..14220
DNA (852bp) protein (284aa)
mechanosensitive ion channel protein n=1 Tax=Rhizobium loti RepID=UPI00035D387D rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:AID33106.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1455_15
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14253..15548)
DNA (1296bp) protein (432aa)
Arabinose efflux permease family protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGS2_MESAW rbh
arabinose efflux permease family protein rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGB43725.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1455_16
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15680..16312)
DNA (633bp) protein (211aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003CF9E8E related cluster n=1 Tax=unknown RepID=UPI0003CF9E8E rbh
nicotinate/nicotinamide nucleotide adenylyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_1455_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16485..16988)
DNA (504bp) protein (168aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
gamma-glutamyl phosphate reductase n=1 Tax=Rhizobium loti RepID=UPI000363548D
SCNpilot_expt_1000_bf_scaffold_1455_18
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17761..18903)
DNA (1143bp) protein (381aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] rbh
Glutamate 5-kinase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G105_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_1455_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18908..19939)
DNA (1032bp) protein (344aa)
GTPase Obg n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKQ0_9RHIZ rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Obg family GTPase CgtA rbh
SCNpilot_expt_1000_bf_scaffold_1455_20
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20329..20841
DNA (513bp) protein (171aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLY6_MESCW
endonuclease/exonuclease/phosphatase; K06896
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADV10371.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying 20 items

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