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SCNpilot_expt_1000_bf_scaffold_1480

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1480_1
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1568
DNA (1566bp) protein (522aa)
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1] rbh
GMC type oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMV6_9PROT
GMC oxidoreductase {ECO:0000313|EMBL:KCB42691.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
SCNpilot_expt_1000_bf_scaffold_1480_2
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1576..2514
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. YI23 RepID=G8MMT9_9BURK
lysR; LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AET94128.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_expt_1000_bf_scaffold_1480_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2568..4049)
DNA (1482bp) protein (494aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Pannonibacter phragmitetus RepID=UPI000370CAA3
Aldehyde dehydrogenase 2B4 {ECO:0000313|EMBL:ADZ71949.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_1480_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4256..5431
DNA (1176bp) protein (392aa)
CoA-transferase (EC:2.8.3.-) rbh
CoA-transferase family III family protein 33 {ECO:0000313|EMBL:ADP17934.1}; EC=2.8.3.- {ECO:0000313|EMBL:ADP17934.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
CoA-transferase family III family protein 33 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HI75_ACHXA rbh
SCNpilot_expt_1000_bf_scaffold_1480_5
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5428..6426)
DNA (999bp) protein (333aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A89E3
LysR family transcriptional regulator {ECO:0000313|EMBL:KHD18075.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1480_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6599..8200
DNA (1602bp) protein (534aa)
Oxidoreductase, GMC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMA1_9PROT
Oxidoreductase, GMC family protein {ECO:0000313|EMBL:EDP65705.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
choline dehydrogenase-like
SCNpilot_expt_1000_bf_scaffold_1480_7

Not on your lists

comp(8367..9299)
DNA (933bp) protein (311aa)
3-hydroxy-3-methylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] rbh
Pyruvate carboxyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U293_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN89438.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_1480_8
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9494..10675
DNA (1182bp) protein (394aa)
Formyl-CoA transferase {ECO:0000313|EMBL:KIG01899.1}; EC=2.8.3.16 {ECO:0000313|EMBL:KIG01899.1};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
III protein, CoA-transferase family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZW74_9PROT rbh
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1480_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10722..11726
DNA (1005bp) protein (335aa)
ABC transporter permease (EC:3.6.3.17); K02057 simple sugar transport system permease protein rbh
Inner-membrane translocator n=1 Tax=Nitratireductor indicus C115 RepID=K2N2I3_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:EKF41603.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_1480_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11756..12778
DNA (1023bp) protein (341aa)
ABC transporter substrate-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PKK5_9RHIZ
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAJ97077.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
ABC transporter substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1480_11
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12942..15065
DNA (2124bp) protein (708aa)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2P2P7_9RHIZ
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAJ97076.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
inner-membrane translocator
SCNpilot_expt_1000_bf_scaffold_1480_12
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15062..15787
DNA (726bp) protein (242aa)
Putative enzyme n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HVE2_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:ETM67453.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
strictosidine synthase
SCNpilot_expt_1000_bf_scaffold_1480_13
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15784..16134
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036953A9
Uncharacterized protein {ECO:0000313|EMBL:KGF70907.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1480_14
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16131..18167
DNA (2037bp) protein (679aa)
ribose ABC transporter ATP-binding protein (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter-like protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NUV3_9RHIZ
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAJ97074.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_expt_1000_bf_scaffold_1480_15
unknown

Not on your lists

18122..18430
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1480_16
unknown

Not on your lists

comp(18535..18891)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1480_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19007..19510
DNA (504bp) protein (168aa)
AsnC family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2T8Q8_RHORU
Transcriptional regulator {ECO:0000313|EMBL:KFC75664.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
SCNpilot_expt_1000_bf_scaffold_1480_18
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19563..20438)
DNA (876bp) protein (292aa)
HpcH/HpaI aldolase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
HpcH/HpaI aldolase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IAU4_METNO
HpcH/HpaI aldolase {ECO:0000313|EMBL:ACL55337.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_1480_19
bacterium YEK0313, Bacteria

Not on your lists

20632..21159
DNA (528bp) protein (176aa)
Enoyl CoA hydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2PQ60_9RHIZ
Putative enoyl-CoA hydratase echA8 {ECO:0000313|EMBL:CEJ15265.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
fadB; enoyl CoA hydratase
SCNpilot_expt_1000_bf_scaffold_1480_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21197..21418
DNA (222bp) protein (74aa)
Enoyl CoA hydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2PQ60_9RHIZ
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAN78132.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fadB; enoyl CoA hydratase
SCNpilot_expt_1000_bf_scaffold_1480_21
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21421..22722
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZQ9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ02540.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
MmgE/PrpD family protein
SCNpilot_expt_1000_bf_scaffold_1480_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22823..23794
DNA (972bp) protein (324aa)
gluconolaconase n=1 Tax=Leucothrix mucor RepID=UPI0003B75246
SMP-30/gluconolaconase/LRE-like region family protein 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_1000_bf_scaffold_1480_23
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24164..25270
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WXQ0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB91299.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
sugar ABC transporter periplasmic component-like protein
SCNpilot_expt_1000_bf_scaffold_1480_24
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25284..26822
DNA (1539bp) protein (513aa)
sugar ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter related protein n=1 Tax=Frankia sp. EUN1f RepID=D3D6K5_9ACTO
ABC transporter related protein {ECO:0000313|EMBL:EFC81430.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
SCNpilot_expt_1000_bf_scaffold_1480_25
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26824..27867
DNA (1044bp) protein (348aa)
ABC sugar transporter, permease component n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SCM5_RHOSR
sugar ABC transporter permease; K10440 ribose transport system permease protein
ABC sugar transporter, permease component {ECO:0000313|EMBL:ABG94711.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
SCNpilot_expt_1000_bf_scaffold_1480_26
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27890..28300
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ELG3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKB35057.1}; TaxID=1123719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; unclassified Bacillaceae.;" source="Bacillaceae bacterium MTCC 8252.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1480_27
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28330..29226
DNA (897bp) protein (299aa)
Putative carboxylesterase protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5EYK3_9RHIZ
Putative carboxylesterase protein {ECO:0000313|EMBL:CCV10182.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
putative carboxylesterase protein
SCNpilot_expt_1000_bf_scaffold_1480_28
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29410..29898
DNA (489bp) protein (163aa)
Raf kinase inhibitor-like protein, YbhB/YbcL family n=1 Tax=Serratia marcescens FGI94 RepID=L0MFS4_SERMA
Raf kinase inhibitor-like protein, YbhB/YbcL family
Kinase inhibitor protein {ECO:0000313|EMBL:GAN69615.1}; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
SCNpilot_expt_1000_bf_scaffold_1480_29
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30155..30400
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000379F4C6
Na/Pi cotransporter {ECO:0000313|EMBL:KHJ54287.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
Na/Pi cotransporter II-like protein; K03324 phosphate:Na+ symporter
SCNpilot_expt_1000_bf_scaffold_1480_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30933..31850
DNA (918bp) protein (306aa)
homoserine dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00037B0847
SAF domain protein {ECO:0000313|EMBL:CDX57006.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SAF domain-containing protein
Displaying items 1-30 of 89 in total

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