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SCNpilot_expt_1000_bf_scaffold_1517

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1517_1
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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68..274
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379C307
Uncharacterized protein {ECO:0000313|EMBL:KGF67105.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1517_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

757..1053
DNA (297bp) protein (99aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Methionine aminopeptidase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZX3_9SPHN
methionine aminopeptidase
SCNpilot_expt_1000_bf_scaffold_1517_3
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1280..3004
DNA (1725bp) protein (575aa)
anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase (EC:3.2.1.-); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GX60_CAUCN
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCNpilot_expt_1000_bf_scaffold_1517_4
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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comp(3086..3913)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B66376
hypothetical protein
Tax=RBG_16_Planctomycetes_59_8_curated
SCNpilot_expt_1000_bf_scaffold_1517_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3925..5052)
DNA (1128bp) protein (376aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PES7_9FIRM
NADH-dependent dyhydrogenase family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_expt_1000_bf_scaffold_1517_6
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5086..5928)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4K6_MESOW
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEH87326.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1517_7
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5921..6823)
DNA (903bp) protein (301aa)
Spermidine/putrescine ABC transporter, permease protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ53_9RHOB
Spermidine/putrescine ABC transporter, permease protein {ECO:0000313|EMBL:EAP77384.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_1517_8
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6820..7893)
DNA (1074bp) protein (358aa)
UPI0003CED46F related cluster n=1 Tax=unknown RepID=UPI0003CED46F
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY34994.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1517_9
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7914..8969)
DNA (1056bp) protein (352aa)
UPI0003CF097F related cluster n=1 Tax=unknown RepID=UPI0003CF097F
ABC transporter {ECO:0000313|EMBL:ESY78889.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
ABC transporter binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1517_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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9184..9567
DNA (384bp) protein (128aa)
Uncharacterized protein id=14632573 bin=bin9_gal15 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
cupin
Tax=CSP1_3_Armatimonadetes
SCNpilot_expt_1000_bf_scaffold_1517_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9587..10603
DNA (1017bp) protein (339aa)
Glycosyl hydrolase BNR repeat n=1 Tax=uncultured marine group III euryarchaeote KM3-28-E8 RepID=B3V6K0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX07939.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
BNR repeat-containing glycosyl hydrolase
SCNpilot_expt_1000_bf_scaffold_1517_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10638..11327
DNA (690bp) protein (230aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Variovorax sp. CF313 RepID=J3CH68_9BURK
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EJL71341.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
SCNpilot_expt_1000_bf_scaffold_1517_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11334..11684
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVU0_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI72519.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_expt_1000_bf_scaffold_1517_14
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

11708..13243
DNA (1536bp) protein (512aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) {ECO:0000313|EMBL:ACM07123.1}; EC=6.3.5.- {ECO:0000313|EMBL:ACM07123.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3U7_THERP
SCNpilot_expt_1000_bf_scaffold_1517_15
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13227..14360
DNA (1134bp) protein (378aa)
glycoside hydrolase family 3; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Glycoside hydrolase family 3 domain protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHJ4_BEII9
SCNpilot_expt_1000_bf_scaffold_1517_16
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14384..14596)
DNA (213bp) protein (71aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
acetate kinase n=1 Tax=Rhizobium loti RepID=UPI00036C62AC
SCNpilot_expt_1000_bf_scaffold_1517_17
unknown

Not on your lists

14991..15374
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1517_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15563..17953)
DNA (2391bp) protein (797aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
phosphoketolase; K01636 [EC:4.1.2.-] rbh
Probable phosphoketolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6N1_9RHIZ rbh
Displaying 18 items

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