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SCNpilot_expt_1000_bf_scaffold_1577

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1577_1
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288..458)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00037E3FA3
Uncharacterised protein {ECO:0000313|EMBL:CRE29508.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_expt_1000_bf_scaffold_1577_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

617..1354
DNA (738bp) protein (246aa)
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDX23248.1}; EC=1.2.1.27 {ECO:0000313|EMBL:CDX23248.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Methylmalonic acid semialdehyde dehydrogenase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGT7_MESAW
methylmalonic acid semialdehyde dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1577_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1567..1869
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFF6_MESAW
hypothetical protein
Putative signal peptide protein {ECO:0000313|EMBL:CDX25340.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_expt_1000_bf_scaffold_1577_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2092..2409
DNA (318bp) protein (106aa)
Mll3983 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F16_RHILO
Uncharacterized protein {ECO:0000313|EMBL:AID33085.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1577_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2635..3294)
DNA (660bp) protein (220aa)
Transcriptional regulator, GntR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFJ7_MESOW rbh
GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEH85742.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1577_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3397..4290
DNA (894bp) protein (298aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
Dihydrodipicolinate synthase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F18_RHILO rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:BAB50749.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1577_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4425..5669
DNA (1245bp) protein (415aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGK0_9RHIZ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDX46764.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glycine/D-amino acid oxidase, deaminating rbh
SCNpilot_expt_1000_bf_scaffold_1577_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5678..6679
DNA (1002bp) protein (334aa)
4-hydroxyproline epimerase {ECO:0000313|EMBL:CDX23258.1}; EC=5.1.1.8 {ECO:0000313|EMBL:CDX23258.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hydroxyproline-2-epimerase; K12658 4-hydroxyproline epimerase [EC:5.1.1.8] rbh
4-hydroxyproline epimerase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EYW0_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_1577_9
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7014..7916
DNA (903bp) protein (301aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFG2_MESAW rbh
branched-chain amino acid ABC-type transport system, permease component rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:AGB43746.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1577_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7921..9312
DNA (1392bp) protein (464aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGK5_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:EHH09143.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
livm1; ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1577_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9312..10376
DNA (1065bp) protein (355aa)
ATP-binding component of ABC transporter (High-affinity branched-chain amino acid transport) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGK6_9RHIZ rbh
ATP-binding component of ABC transporter (High-affinity branched-chain amino acid transport) {ECO:0000313|EMBL:EHH09144.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1577_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10376..11104
DNA (729bp) protein (243aa)
High-affinity branched-chain amino acid ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CDX46776.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDX46776.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ATP-binding component of ABC transporter n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F24_RHILO rbh
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1577_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11215..11562
DNA (348bp) protein (116aa)
Mll3972 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F25_RHILO
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AID33076.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_1577_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11701..12819
DNA (1119bp) protein (373aa)
Extracellular ligand-binding receptor n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM17_MESCW rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADV10402.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1577_15
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13107..16586
DNA (3480bp) protein (1160aa)
Pyruvate carboxylase {ECO:0000313|EMBL:KIF42676.1}; EC=6.4.1.1 {ECO:0000313|EMBL:KIF42676.1};; Flags: Fragment;; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
pyruvate carboxylase; K01958 pyruvate carboxylase [EC:6.4.1.1]
pyruvate carboxylase, partial n=1 Tax=Rhizobium meliloti RepID=UPI00036492C4
SCNpilot_expt_1000_bf_scaffold_1577_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16681..16941
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FDFC30
UPF0335 protein MPLB_650004 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1577_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16964..17404
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y470_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX23277.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1577_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17411..17710
DNA (300bp) protein (100aa)
UPI0003CED163 related cluster n=1 Tax=unknown RepID=UPI0003CED163
Uncharacterized protein {ECO:0000313|EMBL:CDX50022.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1577_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17787..18188)
DNA (402bp) protein (134aa)
Methionine sulfoxide reductase B {ECO:0000313|EMBL:CDX45494.1}; EC=1.8.4.11 {ECO:0000313|EMBL:CDX45494.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
transcriptional regulator; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Transcriptional regulator, putative n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F32_RHILO
SCNpilot_expt_1000_bf_scaffold_1577_20
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18578..19768)
DNA (1191bp) protein (397aa)
von Willebrand factor A n=1 Tax=Rhizobium loti RepID=UPI00037249DC rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV04765.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K09989 hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1577_21
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19778..20545)
DNA (768bp) protein (256aa)
Mlr3960 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F35_RHILO rbh
hypothetical protein rbh
Mlr3960 protein {ECO:0000313|EMBL:BAB50732.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1577_22
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20566..21012)
DNA (447bp) protein (149aa)
GCN5 family N-acetyltransferase n=1 Tax=Rhizobium loti RepID=UPI00036C89A8
Acetyltransferase family protein {ECO:0000313|EMBL:AID33067.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1577_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21101..21940)
DNA (840bp) protein (280aa)
UPI0003CDF9D7 related cluster n=1 Tax=unknown RepID=UPI0003CDF9D7 rbh
Putative ATPase, AAA family {ECO:0000313|EMBL:CDX45509.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1577_24
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22315..23874)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003610206 rbh
glycosyl transferase family protein rbh
Glycosyl transferase, family 39 {ECO:0000313|EMBL:ADZ71883.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_1577_25
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23832..25034)
DNA (1203bp) protein (401aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036369A5
GtrA-like family protein {ECO:0000313|EMBL:AID33427.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_1577_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25531..26250
DNA (720bp) protein (240aa)
Phosphoesterase, PA-phosphatase related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21DC5_RHOPB
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ABD85611.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_1000_bf_scaffold_1577_27
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26596..26892
DNA (297bp) protein (99aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Rhizobium loti RepID=UPI00036E543F
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1577_28
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27332..27826
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFH8_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB43761.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1577_29
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27904..28671
DNA (768bp) protein (256aa)
Integral membrane protein TerC n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM29_MESCW rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX45522.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
integral membrane protein TerC rbh
SCNpilot_expt_1000_bf_scaffold_1577_30
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28699..29166)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KI82_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB43763.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Displaying items 1-30 of 44 in total

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