ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1819

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1819_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(387..596)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA40_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX26898.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1819_2
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1433..2680
DNA (1248bp) protein (416aa)
Rieske (2Fe-2S) iron-sulfur domain n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAF0_MESCW rbh
Rieske (2Fe-2S) iron-sulfur domain; K00479 Rieske 2Fe-2S family protein rbh
Rieske (2Fe-2S) iron-sulfur domain {ECO:0000313|EMBL:ADV09571.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1819_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2691..2867
DNA (177bp) protein (59aa)
NADH oxidase n=1 Tax=Rhizobium loti RepID=UPI0003659A27
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:AID33948.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
flavodoxin reductase family protein
SCNpilot_expt_1000_bf_scaffold_1819_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2864..3793
DNA (930bp) protein (310aa)
Ferredoxin n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA38_9RHIZ
Ferredoxin {ECO:0000313|EMBL:EHH11351.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ferredoxin
SCNpilot_expt_1000_bf_scaffold_1819_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3955..4386
DNA (432bp) protein (144aa)
UPI0003CEFA36 related cluster n=1 Tax=unknown RepID=UPI0003CEFA36
Uncharacterized protein {ECO:0000313|EMBL:ESY67778.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1819_6
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4427..5473
DNA (1047bp) protein (349aa)
UPI0003CE5804 related cluster n=1 Tax=unknown RepID=UPI0003CE5804 rbh
HPr kinase rbh
HPr kinase {ECO:0000313|EMBL:ESY67779.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_1819_7
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5470..6258
DNA (789bp) protein (263aa)
UPI0003CF53F7 related cluster n=1 Tax=unknown RepID=UPI0003CF53F7 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ESW80904.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_1819_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6255..7007
DNA (753bp) protein (251aa)
Glycosyl transferase family 2 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5EXS9_9RHIZ rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:CCV09902.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
family 2 glycosyl transferase rbh
SCNpilot_expt_1000_bf_scaffold_1819_9
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7010..7684
DNA (675bp) protein (225aa)
Glycosyl transferase family 2 n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GIN0_9RHIZ rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ESY18783.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
glycosyl transferase rbh
SCNpilot_expt_1000_bf_scaffold_1819_10
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7684..9156
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHI6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV03730.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1819_11
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9228..10757)
DNA (1530bp) protein (510aa)
protease Do (EC:3.4.21.108) rbh
Protease Do n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAG0_MESCW rbh
Protease Do family protein {ECO:0000313|EMBL:AID33878.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_1819_12
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11093..12340)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D2FB8 rbh
Tetracycline resistance protein {ECO:0000313|EMBL:EIT70662.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
tetA; tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein rbh
SCNpilot_expt_1000_bf_scaffold_1819_13
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12546..13265)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAG1_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV09582.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1819_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13282..14430)
DNA (1149bp) protein (383aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11]
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobiu
6-phosphofructokinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CS6_RHILO
SCNpilot_expt_1000_bf_scaffold_1819_15
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14534..15295)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000375B86F rbh
Ykud domain protein {ECO:0000313|EMBL:AID33882.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1819_16
unknown

Not on your lists

15325..15651
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1819_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15836..16459
DNA (624bp) protein (208aa)
UPI0003CFD5DB related cluster n=1 Tax=unknown RepID=UPI0003CFD5DB rbh
Lysine exporter LysE/YggA {ECO:0000313|EMBL:CDX53920.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
lysine exporter protein LysE/YggA rbh
SCNpilot_expt_1000_bf_scaffold_1819_18
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16470..17774
DNA (1305bp) protein (435aa)
UPI0003CFE2C1 related cluster n=1 Tax=unknown RepID=UPI0003CFE2C1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ60277.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1819_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17857..19311
DNA (1455bp) protein (485aa)
Xylulokinase {ECO:0000313|EMBL:CDX12940.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDX12940.1};; EC=2.7.1.17 {ECO:0000313|EMBL:CDX12940.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
xylulokinase (EC:2.7.1.17); K00854 xylulokinase [EC:2.7.1.17] rbh
Xylulokinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CS0_RHILO rbh
SCNpilot_expt_1000_bf_scaffold_1819_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19580..19876)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F0R0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX15603.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1819_21
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19988..21313
DNA (1326bp) protein (442aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] rbh
xylose isomerase n=1 Tax=Rhizobium loti RepID=UPI00037301DC rbh
SCNpilot_expt_1000_bf_scaffold_1819_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21412..21903
DNA (492bp) protein (164aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAH1_MESCW
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADV09592.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1819_23
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22066..22275
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F195_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCV09928.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_expt_1000_bf_scaffold_1819_24
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22392..23813)
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) RepID=A9MR22_SALAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX21317.1}; TaxID=41514 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980).;"
SCNpilot_expt_1000_bf_scaffold_1819_25
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23915..24895)
DNA (981bp) protein (327aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FD66_9RHIZ rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDX15223.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain rbh
SCNpilot_expt_1000_bf_scaffold_1819_26
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24975..25409
DNA (435bp) protein (145aa)
UPI0003CF4397 related cluster n=1 Tax=unknown RepID=UPI0003CF4397
Uncharacterized protein {ECO:0000313|EMBL:AID33894.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1819_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25406..25912
DNA (507bp) protein (169aa)
UPI0003CF4397 related cluster n=1 Tax=unknown RepID=UPI0003CF4397
Uncharacterized protein {ECO:0000313|EMBL:CDX15241.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
Displaying 27 items

View Taxonomy