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SCNpilot_expt_1000_bf_scaffold_1823

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1823_1
unknown

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comp(48..365)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1823_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(362..1015)
DNA (654bp) protein (218aa)
Nuclease SNase-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S5E6_RHIET
nuclease SNase-like protein
Nuclease SNase-like protein {ECO:0000313|EMBL:AGS25135.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_expt_1000_bf_scaffold_1823_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1012..1620)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae RepID=E7EJA8_RHILV
Nuclease SNase-like protein {ECO:0000313|EMBL:CDN95488.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1823_4
unknown

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1951..2289
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1823_5
unknown

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comp(2596..3069)
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1823_6
unknown

Not on your lists

4166..4669
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1823_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4678..5109
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QE74_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN95510.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
exported protein of unknown function
SCNpilot_expt_1000_bf_scaffold_1823_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5625..6449
DNA (825bp) protein (275aa)
UPI0003CFBF03 related cluster n=1 Tax=unknown RepID=UPI0003CFBF03
Uncharacterized protein {ECO:0000313|EMBL:ESZ11036.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
lytic transglycosylase-like protein
SCNpilot_expt_1000_bf_scaffold_1823_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6449..6829
DNA (381bp) protein (127aa)
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCY2_RHILT
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJB08298.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
Conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
SCNpilot_expt_1000_bf_scaffold_1823_10
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6839..7165
DNA (327bp) protein (109aa)
Type IV secretory pathway VirB3 family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A598_RHILW
Type VI secretion protein {ECO:0000313|EMBL:KJF65665.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
type IV secretory pathway VirB3 family protein; K03198 type IV secretion system protein VirB3
SCNpilot_expt_1000_bf_scaffold_1823_11
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7166..9667
DNA (2502bp) protein (834aa)
UPI0003D00830 related cluster n=1 Tax=unknown RepID=UPI0003D00830 rbh
ATPase {ECO:0000313|EMBL:ESZ11033.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
trbE; TrbE rbh
SCNpilot_expt_1000_bf_scaffold_1823_12
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9648..10814
DNA (1167bp) protein (389aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QE79_9RHIZ rbh
Soluble lytic murein transglycosylase-like protein rbh
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:CDI11898.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_expt_1000_bf_scaffold_1823_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10842..11612
DNA (771bp) protein (257aa)
UPI0003D02C88 related cluster n=1 Tax=unknown RepID=UPI0003D02C88
Conjugal transfer protein {ECO:0000313|EMBL:ESZ11031.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
conjugal transfer protein
SCNpilot_expt_1000_bf_scaffold_1823_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11609..11806
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCY5_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB08303.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1823_15
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11820..12590
DNA (771bp) protein (257aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A5A3_RHILW
TrbL/VirB6 plasmid conjugal transfer protein; K03201 type IV secretion system protein VirB6
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KJF65661.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
Displaying 15 items

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