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SCNpilot_expt_1000_bf_scaffold_11476

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11476_1
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..477
DNA (477bp) protein (159aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Ruegeria conchae RepID=UPI0002379656
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EAR51168.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_11476_2
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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483..1286
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=Pseudomonas putida RepID=A5W231_PSEP1
Oxidoreductase {ECO:0000313|EMBL:KIY37667.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_11476_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1330..1776)
DNA (447bp) protein (149aa)
UPI0003D0133E related cluster n=1 Tax=unknown RepID=UPI0003D0133E
Uncharacterized protein {ECO:0000313|EMBL:CDX12107.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
iron-sulfur cluster biosynthesis protein, NifU-like protein
SCNpilot_expt_1000_bf_scaffold_11476_4
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2017..2652
DNA (636bp) protein (212aa)
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] rbh
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
GTP cyclohydrolase 1 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4S4_MESOW rbh
SCNpilot_expt_1000_bf_scaffold_11476_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2690..3148
DNA (459bp) protein (153aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F5Z9_9RHIZ
SCNpilot_expt_1000_bf_scaffold_11476_6
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3247..4041
DNA (795bp) protein (265aa)
Patatin n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4S2_MESOW rbh
Patatin; K07001 NTE family protein rbh
Patatin {ECO:0000313|EMBL:AEH88475.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying 6 items

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