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SCNpilot_expt_1000_bf_scaffold_3040

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3040_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1479
DNA (1479bp) protein (493aa)
UPI0003CE32F6 related cluster n=1 Tax=unknown RepID=UPI0003CE32F6
Potassium transporter {ECO:0000313|EMBL:ESY63269.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
potassium efflux system protein; K11747 glutathione-regulated potassium-efflux system protein KefB
SCNpilot_expt_1000_bf_scaffold_3040_2
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(1313..1798)
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71548.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SCNpilot_expt_1000_bf_scaffold_3040_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1865..2329)
DNA (465bp) protein (155aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AEH88584.1}; EC=2.7.6.3 {ECO:0000313|EMBL:AEH88584.1};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Rhizobium loti RepID=UPI00036473E4
SCNpilot_expt_1000_bf_scaffold_3040_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2313..2672)
DNA (360bp) protein (120aa)
UPI0003CDED22 related cluster n=1 Tax=unknown RepID=UPI0003CDED22
Dienelactone hydrolase {ECO:0000313|EMBL:ESW91124.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
dihydroneopterin aldolase
SCNpilot_expt_1000_bf_scaffold_3040_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2676..3524)
DNA (849bp) protein (283aa)
dihydroxypteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] rbh
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
dihydropteroate synthase n=1 Tax=Rhizobium loti RepID=UPI00035D7A38 rbh
SCNpilot_expt_1000_bf_scaffold_3040_6
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3624..4241
DNA (618bp) protein (206aa)
UPI0003CF0EDC related cluster n=1 Tax=unknown RepID=UPI0003CF0EDC rbh
Peptidase {ECO:0000313|EMBL:ESY02861.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
putative secreted Zn-dependent protease rbh
SCNpilot_expt_1000_bf_scaffold_3040_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4440..5921
DNA (1482bp) protein (494aa)
UPI0003CF240C related cluster n=1 Tax=unknown RepID=UPI0003CF240C rbh
Putative membrane transport protein {ECO:0000313|EMBL:CDX26822.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
membrane transporter rbh
SCNpilot_expt_1000_bf_scaffold_3040_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5941..6966)
DNA (1026bp) protein (342aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Ferredoxin--NADP reductase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPX3_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3040_9
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7045..7365)
DNA (321bp) protein (107aa)
Ferredoxin n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQ86_MESAW
ferredoxin
2Fe-2S ferredoxin {ECO:0000313|EMBL:ESY91323.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_expt_1000_bf_scaffold_3040_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7464..7832)
DNA (369bp) protein (123aa)
Hpt protein n=2 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y727_MESOW
Hpt protein
Hpt protein {ECO:0000313|EMBL:AEH88577.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_3040_11
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8112..10796
DNA (2685bp) protein (895aa)
UPI0003D00258 related cluster n=1 Tax=unknown RepID=UPI0003D00258 rbh
Kinesin {ECO:0000313|EMBL:ESZ23913.1}; Flags: Fragment;; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
kinesin-like protein
Displaying 11 items

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