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SCNpilot_expt_1000_bf_scaffold_3096

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3096_1
unknown

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3096_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220..1752)
DNA (1533bp) protein (511aa)
Acid phosphatase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNB0_MESAW rbh
Acid phosphatase {ECO:0000313|EMBL:CDX24472.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
acid phosphatase rbh
SCNpilot_expt_1000_bf_scaffold_3096_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1950..4253
DNA (2304bp) protein (768aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICN9_METNO rbh
peptidase C14 caspase catalytic subunit p20 rbh
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL57450.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_3096_4
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4250..4591
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEL1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX69963.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3096_5
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4900..6246
DNA (1347bp) protein (449aa)
UPI0003CE87B6 related cluster n=1 Tax=unknown RepID=UPI0003CE87B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW72938.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
peptidase C14 caspase catalytic subunit p20
SCNpilot_expt_1000_bf_scaffold_3096_6
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6556..7143)
DNA (588bp) protein (196aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBK8_MESOW rbh
bifunctional deaminase-reductase domain-containing protein rbh
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:AEH87755.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_3096_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7254..7670
DNA (417bp) protein (139aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNI5_MESAW
putative transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:CDX61722.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_3096_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7801..9078
DNA (1278bp) protein (426aa)
Cytochrome c peroxidase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJR0_MESAW rbh
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:CDX24469.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cytochrome c peroxidase rbh
SCNpilot_expt_1000_bf_scaffold_3096_9

Not on your lists

comp(9114..10457)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_1880 RepID=L7VVH6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC71509.1}; TaxID=1256556 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1880.;"
serine peptidase
SCNpilot_expt_1000_bf_scaffold_3096_10
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10497..11525)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HNW7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ62458.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
SCNpilot_expt_1000_bf_scaffold_3096_11
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11557..12903)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2J3S9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUC00043.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3096_12
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12903..14270)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HPP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ62456.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3096_13
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14267..15661)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HP69_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ62455.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3096_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16119..17366
DNA (1248bp) protein (416aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] rbh
DNA polymerase IV n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7E4_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_3096_15
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17390..18274)
DNA (885bp) protein (295aa)
UPI0003CE6CE1 related cluster n=1 Tax=unknown RepID=UPI0003CE6CE1 rbh
Threonine transporter RhtB {ECO:0000313|EMBL:ESY72055.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein; K11939 inner membrane transporter RhtA rbh
SCNpilot_expt_1000_bf_scaffold_3096_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18713..19396)
DNA (684bp) protein (228aa)
Mll1937 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98JH6_RHILO rbh
hypothetical protein rbh
Mll1937 protein {ECO:0000313|EMBL:BAB49189.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_3096_17
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19776..20048)
DNA (273bp) protein (91aa)
Cell division topological specificity factor n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KLE6_MESAW
cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_3096_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20045..20860)
DNA (816bp) protein (272aa)
Site-determining protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAV8_MESCW rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
septum site-determining protein MinD; K03609 septum site-determining protein MinD rbh
SCNpilot_expt_1000_bf_scaffold_3096_19
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20987..21832)
DNA (846bp) protein (282aa)
Probable septum site-determining protein MinC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KN17_MESAW rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
septum site-determining protein MinC rbh
SCNpilot_expt_1000_bf_scaffold_3096_20
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22349..23554
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036172D4
FAD linked oxidase domain protein {ECO:0000313|EMBL:CDX27968.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
d-2-hydroxyglutarate dehydrogenase, mitochondrial-like
SCNpilot_expt_1000_bf_scaffold_3096_21
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23769..23918)
DNA (150bp) protein (50aa)
Msl1957 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98JG2_RHILO
Uncharacterized protein {ECO:0000313|EMBL:ESW84624.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3096_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24008..24205)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FC91_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX64222.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
Displaying 22 items

View Taxonomy