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SCNpilot_expt_1000_bf_scaffold_3111

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3111_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..568)
DNA (567bp) protein (189aa)
UPI0003D03D96 related cluster n=1 Tax=unknown RepID=UPI0003D03D96
GTP-binding protein TypA; K06207 GTP-binding protein
GTP-binding protein TypA {ECO:0000313|EMBL:ESZ25528.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_expt_1000_bf_scaffold_3111_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(565..1407)
DNA (843bp) protein (281aa)
GTP-binding protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFL7_9RHIZ
GTP-binding protein {ECO:0000313|EMBL:CDX46604.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GTP-binding protein TypA/BipA
SCNpilot_expt_1000_bf_scaffold_3111_3
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1607..1888
DNA (282bp) protein (94aa)
UPI0003CF2B9B related cluster n=1 Tax=unknown RepID=UPI0003CF2B9B
Uncharacterized protein {ECO:0000313|EMBL:ESY67146.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3111_4
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1982..3583)
DNA (1602bp) protein (534aa)
Alkaline phosphatase D-like protein; K01113 alkaline phosphatase D [EC:3.1.3.1] rbh
Alkaline phosphatase D-related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YEA7_MESOW rbh
Secreted alkaline phosphatase {ECO:0000313|EMBL:CDX25536.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_expt_1000_bf_scaffold_3111_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3686..4423)
DNA (738bp) protein (246aa)
Arabinose efflux permease family protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGZ0_MESAW
Transmembrane transport protein {ECO:0000313|EMBL:CDX45130.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
arabinose efflux permease family protein
SCNpilot_expt_1000_bf_scaffold_3111_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4420..4932)
DNA (513bp) protein (171aa)
Arabinose efflux permease family protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGZ0_MESAW
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGB43664.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_3111_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5006..5614
DNA (609bp) protein (203aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y713_9RHIZ rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EHH12472.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
TetR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_3111_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5686..6099)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035E4167
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEA28417.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_expt_1000_bf_scaffold_3111_9
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6096..7202)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XQ74_9RHIZ
Hydrolase {ECO:0000313|EMBL:KFL25929.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3111_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7199..8293)
DNA (1095bp) protein (365aa)
CNT family concentrative nucleoside transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRB8_9BRAD
CNT family concentrative nucleoside transporter {ECO:0000313|EMBL:ERF80122.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3111_11
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8429..9403)
DNA (975bp) protein (325aa)
AraC family transcriptional regulator n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GTH5_9RHIZ
AraC family transcriptional regulator {ECO:0000313|EMBL:ESX83626.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3111_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9586..11256
DNA (1671bp) protein (557aa)
Dipeptide binding protein component of ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTQ7_9RHIZ rbh
Dipeptide binding protein component of ABC transporter {ECO:0000313|EMBL:EHK55893.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_3111_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11398..11988
DNA (591bp) protein (197aa)
UPI0003D03BD0 related cluster n=1 Tax=unknown RepID=UPI0003D03BD0 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ25523.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3111_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12058..12591)
DNA (534bp) protein (178aa)
inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] rbh
Inorganic pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000255|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000255|HAMAP-Rule:MF_00209}; Short=PPase {ECO:0000255|HAMAP-Rule:MF_00209};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Inorganic pyrophosphatase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=IPYR_RHILO rbh
SCNpilot_expt_1000_bf_scaffold_3111_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12855..13361)
DNA (507bp) protein (169aa)
GCN5-like N-acetyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y710_9RHIZ rbh
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:EHH12469.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
N-acetyltransferase GCN5
SCNpilot_expt_1000_bf_scaffold_3111_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13471..14103)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK91_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV04635.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K08988 putative membrane protein rbh
SCNpilot_expt_1000_bf_scaffold_3111_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14115..14885)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YE99_MESOW rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX52368.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K06872 uncharacterized protein rbh
Displaying 17 items

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