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SCNpilot_expt_1000_bf_scaffold_3163

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3163_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..514
DNA (513bp) protein (171aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGG6_MESOW
binding-protein-dependent transport systems inner membrane component; K12370 dipeptide transport system permease protein
Peptide ABC transporter {ECO:0000313|EMBL:ESY74395.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_3163_2
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

520..1377
DNA (858bp) protein (286aa)
UPI0003CFE4E3 related cluster n=1 Tax=unknown RepID=UPI0003CFE4E3 rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ26473.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
ABC transporter; K12371 dipeptide transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_3163_3
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1374..2201
DNA (828bp) protein (276aa)
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFF7_MESOW rbh
ABC transporter; K12372 dipeptide transport system ATP-binding protein rbh
ABC transporter ATP-binding component {ECO:0000313|EMBL:CDX45876.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_expt_1000_bf_scaffold_3163_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2442..3716)
DNA (1275bp) protein (425aa)
cysteine desulfurase (EC:2.8.1.7) rbh
UPI0003CF5A13 related cluster n=1 Tax=unknown RepID=UPI0003CF5A13 rbh
Aminotransferase {ECO:0000313|EMBL:ESY66713.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_3163_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3812..4486)
DNA (675bp) protein (225aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBL4_9RHIZ rbh
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:EHH10855.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family rbh
SCNpilot_expt_1000_bf_scaffold_3163_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4737..5534)
DNA (798bp) protein (266aa)
UPI0003CEC435 related cluster n=1 Tax=unknown RepID=UPI0003CEC435 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY74390.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
family 3 extracellular solute-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_3163_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5607..6803)
DNA (1197bp) protein (399aa)
Aspartate aminotransferase {ECO:0000313|EMBL:CDX45858.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDX45858.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
UPI0003D05C0F related cluster n=1 Tax=unknown RepID=UPI0003D05C0F rbh
aspartate aminotransferase
SCNpilot_expt_1000_bf_scaffold_3163_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7068..7844)
DNA (777bp) protein (259aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] rbh
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBL7_9RHIZ rbh
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:EHH10858.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_3163_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8456..9133
DNA (678bp) protein (226aa)
Luciferase-like, subgroup n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMX9_MESCW
Uncharacterized protein {ECO:0000313|EMBL:CDX45854.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
luciferase-like protein
SCNpilot_expt_1000_bf_scaffold_3163_10
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9341..9808)
DNA (468bp) protein (156aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J3BLH1_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJL53139.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3163_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9868..10299
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZER2_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL87730.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_expt_1000_bf_scaffold_3163_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10540..10935)
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMX8_MESCW
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADV09283.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_3163_13
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11033..12181)
DNA (1149bp) protein (383aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
Acyl-CoA dehydrogenase domain protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUK9_9RHIZ rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:CCV03356.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_expt_1000_bf_scaffold_3163_14
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12181..12993)
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ESY66720.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ESY66720.1};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
UPI0003CF10FD related cluster n=1 Tax=unknown RepID=UPI0003CF10FD rbh
enoyl-CoA hydratase/isomerase rbh
SCNpilot_expt_1000_bf_scaffold_3163_15
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12990..13460)
DNA (471bp) protein (157aa)
Transcriptional regulator, MarR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFE8_MESOW
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:ESY83453.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_expt_1000_bf_scaffold_3163_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13454..14212)
DNA (759bp) protein (253aa)
UPI0003D046EE related cluster n=1 Tax=unknown RepID=UPI0003D046EE rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ26463.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_3163_17
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14209..15852)
DNA (1644bp) protein (548aa)
hypothetical protein; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
salicylyl-CoA 5-hydroxylase n=1 Tax=Rhizobium loti RepID=UPI00037D6050
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:ESY93794.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
Displaying 17 items

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