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SCNpilot_expt_1000_bf_scaffold_3253

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3253_1
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2311)
DNA (2310bp) protein (770aa)
UPI0003CF5E58 related cluster n=1 Tax=unknown RepID=UPI0003CF5E58
Acriflavine resistance protein B {ECO:0000313|EMBL:ESY97881.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
acriflavin resistance protein
SCNpilot_expt_1000_bf_scaffold_3253_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2311..3534)
DNA (1224bp) protein (408aa)
hemolysin D n=1 Tax=Rhizobium loti RepID=UPI00035FF92B rbh
RND efflux membrane fusion protein rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AID32822.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_3253_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3678..4241
DNA (564bp) protein (188aa)
UPI0003D036DE related cluster n=1 Tax=unknown RepID=UPI0003D036DE
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:AID32821.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3253_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4373..5953
DNA (1581bp) protein (527aa)
UPI0003CEDF6E related cluster n=1 Tax=unknown RepID=UPI0003CEDF6E rbh
Nuclease PIN {ECO:0000313|EMBL:ESY70320.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family rbh
SCNpilot_expt_1000_bf_scaffold_3253_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6063..7223)
DNA (1161bp) protein (387aa)
Patatin n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4S3_9RHIZ rbh
Patatin {ECO:0000313|EMBL:CDX23378.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative esterase of the alpha-beta hydrolase superfamily rbh
SCNpilot_expt_1000_bf_scaffold_3253_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7254..7448)
DNA (195bp) protein (65aa)
Probable acetoacetate decarboxylase {ECO:0000256|HAMAP-Rule:MF_00597}; Short=AAD {ECO:0000256|HAMAP-Rule:MF_00597};; Short=ADC {ECO:0000256|HAMAP-Rule:MF_00597};; EC=4.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00597};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
acetoacetate decarboxylase (EC:4.1.1.4); K01574 acetoacetate decarboxylase [EC:4.1.1.4]
Probable acetoacetate decarboxylase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8G3_MESCW
SCNpilot_expt_1000_bf_scaffold_3253_7
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8185..8973
DNA (789bp) protein (263aa)
D-beta-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
UPI0003CF4550 related cluster n=1 Tax=unknown RepID=UPI0003CF4550 rbh
Cytochrome C biogenesis protein CcmE {ECO:0000313|EMBL:ESY70323.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_3253_8
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9092..11005)
DNA (1914bp) protein (638aa)
GAF sensor protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XJ92_PARAH rbh
GAF sensor protein rbh
GAF sensor protein {ECO:0000313|EMBL:AGT07254.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_3253_9
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11134..11448)
DNA (315bp) protein (105aa)
GAF sensor protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XJ92_PARAH
GAF sensor protein
GAF sensor protein {ECO:0000313|EMBL:AGT07254.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_3253_10
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11618..12424)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D7CFD
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_expt_1000_bf_scaffold_3253_11
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12590..14176)
DNA (1587bp) protein (529aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F50D56
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CCV03709.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
family 5 extracellular solute-binding protein
SCNpilot_expt_1000_bf_scaffold_3253_12
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14304..15182
DNA (879bp) protein (293aa)
hypothetical protein n=2 Tax=Rhizobium meliloti RepID=UPI00038031CC
RpiR family transcriptional regulator {ECO:0000313|EMBL:KJV09493.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
HTH-type transcriptional regulator-like protein
SCNpilot_expt_1000_bf_scaffold_3253_13
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15240..15782)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036550FB
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDX40786.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative acetyltransferase
SCNpilot_expt_1000_bf_scaffold_3253_14
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16217..17380)
DNA (1164bp) protein (388aa)
amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] rbh
UPI0003CE6155 related cluster n=1 Tax=unknown RepID=UPI0003CE6155 rbh
Amidohydrolase {ECO:0000313|EMBL:ESW82461.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_expt_1000_bf_scaffold_3253_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17582..18748
DNA (1167bp) protein (389aa)
penicillin-binding protein; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] rbh
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhizobium loti RepID=UPI000371214B rbh
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 {ECO:0000313|EMBL:EHH13390.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_3253_16
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18753..19838
DNA (1086bp) protein (362aa)
UPI0003CE4C07 related cluster n=1 Tax=unknown RepID=UPI0003CE4C07 rbh
ATP-binding protein {ECO:0000313|EMBL:ESY75271.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
cobalamin synthesis protein P47K rbh
SCNpilot_expt_1000_bf_scaffold_3253_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20143..20373)
DNA (231bp) protein (77aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
response regulator SirA n=1 Tax=Rhizobium loti RepID=UPI00036C96E6
Uncharacterized protein {ECO:0000313|EMBL:CDX42655.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_3253_18
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20383..21321)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003658DAC
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEH86033.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying 18 items

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