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SCNpilot_expt_1000_bf_scaffold_3317

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3317_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..488)
DNA (486bp) protein (162aa)
UPI0003CE1FA1 related cluster n=1 Tax=unknown RepID=UPI0003CE1FA1
Uncharacterized protein {ECO:0000313|EMBL:CDX12160.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3317_2
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

795..2366
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AEI4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KDB52787.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
SCNpilot_expt_1000_bf_scaffold_3317_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2493..3689)
DNA (1197bp) protein (399aa)
glutaryl Co-A dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] rbh
acyl-CoA dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00037841D7 rbh
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:AID32216.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_3317_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3857..4768
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMD3_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:CDX28364.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_3317_5
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4869..5765)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI43_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV16025.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
putative epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_3317_6
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5891..6904
DNA (1014bp) protein (338aa)
Putative araC-like transcription regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI62_9RHIZ rbh
Putative araC-like transcription regulator {ECO:0000313|EMBL:CCV16026.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
AraC family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_3317_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6962..9271)
DNA (2310bp) protein (770aa)
Tex-like protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEM5_9RHIZ rbh
Tex-like protein {ECO:0000313|EMBL:EHH09834.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K06959 uncharacterized protein rbh
SCNpilot_expt_1000_bf_scaffold_3317_8
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9399..10553)
DNA (1155bp) protein (385aa)
6-aminohexanoate-dimer hydrolase; K01453 [EC:3.5.1.46] rbh
6-aminohexanoate-dimer hydrolase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HG2_RHILO rbh
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:BAB49904.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_3317_9
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10593..11789)
DNA (1197bp) protein (399aa)
UPI0003CF1DBA related cluster n=1 Tax=unknown RepID=UPI0003CF1DBA rbh
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:ESY88611.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
penicillin-binding protein, beta-lactamase class C rbh
SCNpilot_expt_1000_bf_scaffold_3317_10
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11849..12883)
DNA (1035bp) protein (345aa)
putrescine/spermidine ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D9918 rbh
spermidine/putrescine-binding periplasmic protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_3317_11
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13011..14045)
DNA (1035bp) protein (345aa)
Putrescine-binding periplasmic protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGM5_MESAW rbh
spermidine/putrescine-binding periplasmic protein rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_3317_12
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14068..14325)
DNA (258bp) protein (86aa)
UPI0003CE1A96 related cluster n=1 Tax=unknown RepID=UPI0003CE1A96
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:AGB44481.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Displaying 12 items

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