name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3565_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..697)
|
nucleoside hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003604D69
rbh
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:CDX43771.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
inosine/uridine-preferring nucleoside hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_2
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(728..931)
|
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YHK5_MESOW
Inosine/uridine-preferring nucleoside hydrolase
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:AEH90378.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(947..1936)
|
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000372F689
rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDX43774.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1924..2964)
|
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A18C1
rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDX54703.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2961..4544)
|
ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CF8EE
rbh
Uncharacterized ABC transporter ATP-binding protein YufO {ECO:0000313|EMBL:CDX28429.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4703..5707)
|
Basic membrane lipoprotein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YHK1_MESOW
rbh
Basic membrane lipoprotein {ECO:0000313|EMBL:CDX28428.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5940..6524
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000372F397
rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX28426.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6521..7105
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6Y6_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX43789.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7229..7774)
|
Enamidase {ECO:0000313|EMBL:CDX28422.1}; EC=3.5.2.18 {ECO:0000313|EMBL:CDX28422.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
amidohydrolase; K15358 enamidase [EC:3.5.2.18]
Enamidase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003817DB0
|
|
SCNpilot_expt_1000_bf_scaffold_3565_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8508..9035)
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000362286D
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDX43795.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
MarR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3565_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9089..9772)
|
isochorismatase hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI000373BCF9
rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:CDX54719.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
isochorismatase hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10018..10860
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375A3AB
rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDX43801.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
NAD-dependent epimerase/dehydratase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10938..11756
|
Levodione reductase {ECO:0000313|EMBL:CDX43803.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDX43803.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
short-chain dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BA318
rbh
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11913..12911)
|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F7AA9A
rbh
Putative high-affinity branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:CDX43807.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
high-affinity branched-chain amino acid transport system permease; K01998 branched-chain amino acid transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12908..14467)
|
Putative high-affinity branched-chain amino acid transport system permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZLN0_ROSLO
rbh
Putative high-affinity branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:CDX28412.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
high-affinity branched-chain amino acid transport system permease; K01997 branched-chain amino acid transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14467..15225)
|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D40CA2
Putative high-affinity branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:CDX43816.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
high-affinity branched-chain amino acid transport ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_3565_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15230..16411)
|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030EEEE0
rbh
Putative aliphatic amidase expression-regulating protein {ECO:0000313|EMBL:CDX54735.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
aliphatic amidase expression-regulating protein; K01999 branched-chain amino acid transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_18
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
16776..17663
|
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003129D1A
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EST53409.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
extracellular solute-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_3565_19
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17721..18377
|
UPI0003CF03B5 related cluster n=1 Tax=unknown RepID=UPI0003CF03B5
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJB96543.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_3565_20
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18374..19042
|
Ectoine/hydroxyectoine ABC transporter, permease protein EhuD n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX95_NITHN
ectoine/hydroxyectoine ABC transporter permease EhuD; K02029 polar amino acid transport system permease protein
Ectoine/hydroxyectoine ABC transporter, permease protein EhuD {ECO:0000313|EMBL:ADE15778.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_21
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
19488..19748
|
aapP; general L-amino acid transport ATP-binding protein AapP; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
arginine ABC transporter ATP-binding protein n=1 Tax=Thermus scotoductus RepID=UPI0003743B56
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:CEE02183.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_22
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19863..21113
|
Threonine synthase {ECO:0000313|EMBL:EAR51292.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EAR51292.1};; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
Threonine synthase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CF35_9RHOB
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3565_23
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21249..21626
|
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P120_AZOS1
hypothetical protein; K07567 TdcF protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74349.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_24
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21651..22430)
|
ArsR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GCC5_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESZ58855.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
IclR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3565_25
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22572..23438)
|
Putative AraC family transcriptional regulator n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KM19_RHISN
AraC family transcriptional regulator
4-hydroxyphenylacetate catabolism regulatory protein, AraC family {ECO:0000313|EMBL:CCE99689.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23528..25120
|
4-hydroxyphenylacetate 3-monooxygenase oxygenase component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTP2_RHITR
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
4-hydroxyphenylacetate 3-monooxygenase oxygenase component {ECO:0000313|EMBL:AGB74582.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_27
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25096..25716
|
hpaC; flavin reductase-like, FMN-binding; K09024 flavin reductase [EC:1.5.1.-]
4-hydroxyphenylacetate 3-monooxygenase, reductase component {ECO:0000313|EMBL:CCE99687.1}; EC=1.14.13.3 {ECO:0000313|EMBL:CCE99687.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Flavin reductase-like, FMN-binding n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF55_RHIFH
|
|
SCNpilot_expt_1000_bf_scaffold_3565_28
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25593..26606)
|
aldehyde dehydrogenase family protein; K09472 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [EC:1.2.1.-]
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:CCE99697.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CCE99697.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Aldehyde dehydrogenase family protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF65_RHIFH
|
|
SCNpilot_expt_1000_bf_scaffold_3565_29
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27138..28589)
|
Uncharacterized amino-acid permease P7G5.06 n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF64_RHIFH
rbh
amino-acid permease P7G5.06
rbh
Uncharacterized amino-acid permease {ECO:0000313|EMBL:CCE99696.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3565_30
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28885..29664
|
Transcriptional regulator, IclR family n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KM13_RHISN
rbh
IclR family transcriptional regulator
rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACP23449.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
|