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SCNpilot_expt_1000_bf_scaffold_3620

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3620_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THB0_MESCW
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADV12435.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_3620_2
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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510..1514
DNA (1005bp) protein (335aa)
UPI0003CF61AD related cluster n=1 Tax=unknown RepID=UPI0003CF61AD rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY77998.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3620_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2087..3346)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA35_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EZQ13669.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
glycoside hydrolase family protein
SCNpilot_expt_1000_bf_scaffold_3620_4
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3811..4872
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEV5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX70063.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
acetyltransferase protein
SCNpilot_expt_1000_bf_scaffold_3620_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5012..6406)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037609F6
Uncharacterized protein {ECO:0000313|EMBL:EZQ13670.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3620_6
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6598..7659
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEV5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX70063.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
acetyltransferase protein
SCNpilot_expt_1000_bf_scaffold_3620_7
Serratia phage phiMAM1, Caudovirales, Viruses

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comp(7735..10083)
DNA (2349bp) protein (783aa)
Putative pectate lyase n=1 Tax=Serratia phage phiMAM1 RepID=K7YXS2_9CAUD
Putative pectate lyase {ECO:0000313|EMBL:AFX93505.1}; TaxID=1262513 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Serratia phage phiMAM1.;"
SCNpilot_expt_1000_bf_scaffold_3620_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10503..10889)
DNA (387bp) protein (129aa)
Transcriptional regulator, MerR family n=8 Tax=Mesorhizobium RepID=F7Y125_MESOW
Putative transcriptional regulator {ECO:0000313|EMBL:CDX59200.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
MerR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3620_9
Sinorhizobium arboris, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11245..11592
DNA (348bp) protein (116aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Sinorhizobium arboris RepID=D1CSN0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABD74834.1}; Flags: Fragment;; TaxID=76745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium arboris.;"
SCNpilot_expt_1000_bf_scaffold_3620_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11636..11983)
DNA (348bp) protein (116aa)
UPI0003CFDB3A related cluster n=1 Tax=unknown RepID=UPI0003CFDB3A
magnesium transporter; K06213 magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_expt_1000_bf_scaffold_3620_11
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11980..13044)
DNA (1065bp) protein (355aa)
UPI0003CF527D related cluster n=1 Tax=unknown RepID=UPI0003CF527D
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
magnesium transporter; K06213 magnesium transporter
SCNpilot_expt_1000_bf_scaffold_3620_12
unknown

Not on your lists

13177..13344
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3620_13
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14101
DNA (279bp) protein (93aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
inorganic diphosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J543_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3620_14
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15055..15168
DNA (114bp) protein (38aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218471}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218470};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
lipB; lipoyltransferase; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
lipoate-protein ligase B n=1 Tax=Rhizobium loti RepID=UPI00036C51A4
Displaying 14 items

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