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SCNpilot_expt_1000_bf_scaffold_3632

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3632_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..423)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T970_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV09445.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_3632_2
unknown

Not on your lists

comp(477..674)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3632_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(680..1699)
DNA (1020bp) protein (340aa)
Putative Alpha3-fucosyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJW4_9RHIZ
Putative Alpha3-fucosyltransferase {ECO:0000313|EMBL:CCV05044.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
alpha-1,3-fucosyltransferase
SCNpilot_expt_1000_bf_scaffold_3632_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1749..2468)
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETC0_9RHIZ rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCV07213.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3632_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2481..3374)
DNA (894bp) protein (298aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
Dihydrodipicolinate synthetase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQZ4_9RHIZ rbh
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:CCV07209.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_expt_1000_bf_scaffold_3632_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3530..4111)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESE2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV07207.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3632_7
unknown

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4280..4399
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3632_8
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5027..5584
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A4106
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
SCNpilot_expt_1000_bf_scaffold_3632_9
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5845..6528
DNA (684bp) protein (228aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T973_MESCW rbh
TetR family transcriptional regulator rbh
Regulatory protein TetR {ECO:0000313|EMBL:ADV09448.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_3632_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6685..9096
DNA (2412bp) protein (804aa)
FAD dependent oxidoreductase; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4] rbh
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T974_MESCW rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADV09449.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_3632_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9179..10432
DNA (1254bp) protein (418aa)
sarcosine oxidase subunit beta; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] rbh
Sarcosine oxidase beta subunit n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CA5_RHILO rbh
Sarcosine oxidase beta subunit {ECO:0000313|EMBL:BAB51716.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_3632_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10443..10709
DNA (267bp) protein (89aa)
sarcosine oxidase subunit delta; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
sarcosine oxidase subunit delta n=1 Tax=Rhizobium loti RepID=UPI00036087D8
Sarcosine oxidase, delta subunit {ECO:0000313|EMBL:AID34066.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_3632_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10706..12118
DNA (1413bp) protein (471aa)
sarcosine oxidase subunit alpha family protein; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
(2Fe-2S)-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003710F6F
Sarcosine oxidase, alpha subunit {ECO:0000313|EMBL:AID34065.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_3632_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12585..13511
DNA (927bp) protein (309aa)
sarcosine oxidase subunit alpha; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
(2Fe-2S)-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003710F6F
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:BAB51714.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_3632_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13504..13794
DNA (291bp) protein (97aa)
Mll5229 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CA8_RHILO
hypothetical protein
Mll5229 protein {ECO:0000313|EMBL:BAB51713.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_3632_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13791..14042
DNA (252bp) protein (84aa)
UPI0003CFB581 related cluster n=1 Tax=unknown RepID=UPI0003CFB581
Uncharacterized protein {ECO:0000313|EMBL:ESZ25827.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3632_17
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14087..14572)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHQ6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH07710.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3632_18
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14671..15699)
DNA (1029bp) protein (343aa)
UPI0003CFFF9C related cluster n=1 Tax=unknown RepID=UPI0003CFFF9C rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CDX37007.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
sugar-binding domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_3632_19
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15838..16644
DNA (807bp) protein (269aa)
UPI0003CE0187 related cluster n=1 Tax=unknown RepID=UPI0003CE0187 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY81687.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3632_20
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16664..17125)
DNA (462bp) protein (154aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
phosphotransferase system enzyme I; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
UPI0003CDEF95 related cluster n=1 Tax=unknown RepID=UPI0003CDEF95
Displaying 20 items

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