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SCNpilot_expt_1000_bf_scaffold_3705

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3705_1
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..186
DNA (186bp) protein (62aa)
UPI0003CE710A related cluster n=1 Tax=unknown RepID=UPI0003CE710A
Membrane protein {ECO:0000313|EMBL:ESY82374.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3705_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

367..1080
DNA (714bp) protein (238aa)
DNA helicase n=1 Tax=Rhizobium loti RepID=UPI000379C6AA rbh
DNA helicase {ECO:0000313|EMBL:ESY66996.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
replicative DNA helicase rbh
SCNpilot_expt_1000_bf_scaffold_3705_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1090..2010)
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B5929 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY66995.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator rbh
SCNpilot_expt_1000_bf_scaffold_3705_4
unknown

Not on your lists

2101..2217
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3705_5
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2348..4540
DNA (2193bp) protein (731aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
catalase/peroxidase; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
catalase/hydroperoxidase HPI(I) n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EDE7E rbh
SCNpilot_expt_1000_bf_scaffold_3705_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4846..5403
DNA (558bp) protein (186aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGX3_MESOW rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX51755.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GCN5-like N-acetyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_3705_7
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5486..6538)
DNA (1053bp) protein (351aa)
L-aminopeptidase/D-esterase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KK98_MESAW rbh
L-aminopeptidase/D-esterase rbh
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:AGB44764.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_3705_8
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6579..6995)
DNA (417bp) protein (139aa)
UPI0003D002CB related cluster n=1 Tax=unknown RepID=UPI0003D002CB
MerR family transcriptional regulator {ECO:0000313|EMBL:ESZ28795.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
transcription regulator MerR DNA binding protein
SCNpilot_expt_1000_bf_scaffold_3705_9
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7569..9308
DNA (1740bp) protein (580aa)
metal-transporting P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
UPI0003CFB67A related cluster n=1 Tax=unknown RepID=UPI0003CFB67A
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:AID31897.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_3705_10
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9351..9737)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003602C1E
Uncharacterized protein {ECO:0000313|EMBL:CDX45783.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3705_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9870..10523
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003681558
Uncharacterized HTH-type transcriptional regulator RHOS4_30730 {ECO:0000313|EMBL:CDX24238.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3705_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10480..11235
DNA (756bp) protein (252aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC:2.6.1.1)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003681558
Uncharacterized HTH-type transcriptional regulator RHOS4_30730 {ECO:0000313|EMBL:CDX12735.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_3705_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11247..12431)
DNA (1185bp) protein (395aa)
UPI0003CFF854 related cluster n=1 Tax=unknown RepID=UPI0003CFF854 rbh
MFS transporter {ECO:0000313|EMBL:ESZ28793.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
major facilitator superfamily protein rbh
SCNpilot_expt_1000_bf_scaffold_3705_14
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12553..12762)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM97_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESW81458.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3705_15
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12919..14583)
DNA (1665bp) protein (555aa)
Na+/Picotransporter n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGX5_MESOW rbh
Na+/Picotransporter; K03324 phosphate:Na+ symporter rbh
Na+/Picotransporter {ECO:0000313|EMBL:AEH86921.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_3705_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14949..15323
DNA (375bp) protein (125aa)
Putative integral membrane protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL22_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX51763.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative integral membrane protein
SCNpilot_expt_1000_bf_scaffold_3705_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15469..17391
DNA (1923bp) protein (641aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
DNA primase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK91_MESCW rbh
SCNpilot_expt_1000_bf_scaffold_3705_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17833..19305
DNA (1473bp) protein (491aa)
RNA polymerase sigma factor RpoD n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJR1_MESAW
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
RNA polymerase sigma factor, sigma-70 family
Displaying 18 items

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