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SCNpilot_expt_1000_bf_scaffold_3836

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3836_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..372)
DNA (372bp) protein (124aa)
UPI0003CE72A6 related cluster n=1 Tax=unknown RepID=UPI0003CE72A6
Peptide ABC transporter {ECO:0000313|EMBL:ESW87532.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_3836_2
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(407..781)
DNA (375bp) protein (125aa)
ABC transporter substrate binding protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUY2_9RHIZ
ABC transporter substrate binding protein {ECO:0000313|EMBL:CCV08057.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_3836_3
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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899..1387
DNA (489bp) protein (163aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KU47_MESAW
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AGB47608.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_3836_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1387..2226
DNA (840bp) protein (280aa)
ABC transporter permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q986R1_RHILO rbh
ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
ABC transporter permease protein {ECO:0000313|EMBL:BAB53392.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_3836_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2223..3971
DNA (1749bp) protein (583aa)
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESX7_9RHIZ rbh
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CCV08054.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter rbh
SCNpilot_expt_1000_bf_scaffold_3836_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3968..4981
DNA (1014bp) protein (338aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhizobium sp. AP16 RepID=J2L4X3_9RHIZ
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EJK82436.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
esterase
SCNpilot_expt_1000_bf_scaffold_3836_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5000..6151
DNA (1152bp) protein (384aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] rbh
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKT5_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_3836_8
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6157..6609)
DNA (453bp) protein (151aa)
UPI0003CE2089 related cluster n=1 Tax=unknown RepID=UPI0003CE2089
Acetyltransferase {ECO:0000313|EMBL:ESY69235.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3836_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6872..7390
DNA (519bp) protein (173aa)
sugar ABC transporter; K10111 maltose/maltodextrin transport system ATP-binding protein [EC:3.6.3.19]
Maltose/maltodextrin transport ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UTL5_9RHIZ
Maltose/maltodextrin transport ATP-binding protein {ECO:0000313|EMBL:ENN84141.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Displaying 9 items

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