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SCNpilot_expt_1000_bf_scaffold_5009

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5009_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6..746)
DNA (741bp) protein (247aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YK65_9RHIZ rbh
methionine-S-sulfoxide reductase rbh
SCNpilot_expt_1000_bf_scaffold_5009_2
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(843..1088)
DNA (246bp) protein (82aa)
UPI0003CFE61C related cluster n=1 Tax=unknown RepID=UPI0003CFE61C
Uncharacterized protein {ECO:0000313|EMBL:ESZ50738.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5009_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1170..1871)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGQ9_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV09995.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_5009_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2347..3321)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003770476 rbh
Uncharacterized protein {ECO:0000313|EMBL:AID33487.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5009_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3728..5533
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Elongation factor 4 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6R5_9RHIZ rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA rbh
SCNpilot_expt_1000_bf_scaffold_5009_6
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5680..6897)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q1B0_9ZZZZ
Contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIX11866.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5009_7
unknown

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comp(6894..7598)
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5009_8
unknown

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7889..8053
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5009_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8174..9448)
DNA (1275bp) protein (425aa)
UPI0003CF5E5B related cluster n=1 Tax=unknown RepID=UPI0003CF5E5B rbh
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:CDX24765.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
family 5 extracellular solute-binding protein rbh
Displaying 9 items

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