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SCNpilot_expt_1000_bf_scaffold_5119

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5119_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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253..810
DNA (558bp) protein (186aa)
Sigma-54 modulation protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4U2_9RHIZ rbh
Sigma-54 modulation protein {ECO:0000313|EMBL:EHH13177.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
sigma-54 modulation protein rbh
SCNpilot_expt_1000_bf_scaffold_5119_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

867..1331
DNA (465bp) protein (155aa)
Sugar-specific enzyme IIA component of PTS {ECO:0000313|EMBL:CDX24092.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDX24092.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
phosphotransferase system enzyme II (EC:2.7.1.69); K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
UPI0003CF1005 related cluster n=1 Tax=unknown RepID=UPI0003CF1005
SCNpilot_expt_1000_bf_scaffold_5119_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1462..1719)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FG02_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX24095.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
uncharacterized small protein
SCNpilot_expt_1000_bf_scaffold_5119_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1782..2207)
DNA (426bp) protein (142aa)
UPI0003CDFDF7 related cluster n=1 Tax=unknown RepID=UPI0003CDFDF7
Heat shock chaperone {ECO:0000313|EMBL:CCV16226.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
heat shock protein Hsp20
SCNpilot_expt_1000_bf_scaffold_5119_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2351..3292
DNA (942bp) protein (314aa)
nucleoside hydrolase; K01239 purine nucleosidase [EC:3.2.2.1] rbh
Nucleoside hydrolase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GT0_RHILO rbh
Nucleoside hydrolase {ECO:0000313|EMBL:BAB50136.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_5119_6
unknown

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3319..3465
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5119_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3400..3720)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCR3_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10905.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_5119_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3821..4435)
DNA (615bp) protein (205aa)
Mlr3188 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GT1_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX44712.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5119_9
unknown

Not on your lists

4683..5147
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036238BC
SCNpilot_expt_1000_bf_scaffold_5119_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5188..5952)
DNA (765bp) protein (255aa)
UPI0003CFB87B related cluster n=1 Tax=unknown RepID=UPI0003CFB87B
Amidase {ECO:0000313|EMBL:CDX55237.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
SCNpilot_expt_1000_bf_scaffold_5119_11
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6674..7558)
DNA (885bp) protein (295aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15] rbh
UPI0003CE81EF related cluster n=1 Tax=unknown RepID=UPI0003CE81EF rbh
Ribokinase {ECO:0000313|EMBL:ESY62930.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_expt_1000_bf_scaffold_5119_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7681..8559)
DNA (879bp) protein (293aa)
methylated-DNA/protein-cysteinemethyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] rbh
Methylated-DNA/protein-cysteinemethyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6P7_MESOW rbh
Methylated-DNA/protein-cysteinemethyltransferase {ECO:0000313|EMBL:AEH86296.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_5119_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8677..9495
DNA (819bp) protein (273aa)
O-methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJF3_9RHIZ rbh
O-methyltransferase {ECO:0000313|EMBL:ESX80135.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
O-methyltransferase domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_5119_14
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9508..9903)
DNA (396bp) protein (132aa)
UPI0003CE5E67 related cluster n=1 Tax=unknown RepID=UPI0003CE5E67
Membrane protein {ECO:0000313|EMBL:ESY77810.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5119_15
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10023..10631
DNA (609bp) protein (203aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
UPI0003D01610 related cluster n=1 Tax=unknown RepID=UPI0003D01610
SCNpilot_expt_1000_bf_scaffold_5119_16
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10607..10789
DNA (183bp) protein (61aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
endonuclease III n=1 Tax=Rhizobium loti RepID=UPI0003649451
SCNpilot_expt_1000_bf_scaffold_5119_17
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10792..11061)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFY5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16212.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein; K08983 putative membrane protein
SCNpilot_expt_1000_bf_scaffold_5119_18
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11515..11988
DNA (474bp) protein (158aa)
UPI0003CED537 related cluster n=1 Tax=unknown RepID=UPI0003CED537
Acetyltransferase {ECO:0000313|EMBL:ESY77813.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
GCN5-like N-acetyltransferase
SCNpilot_expt_1000_bf_scaffold_5119_19
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11995..12477)
DNA (483bp) protein (161aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCT5_MESCW
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADV10927.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_5119_20
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12605..12901)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FML9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX80149.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5119_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15122..15544
DNA (423bp) protein (141aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCT7_MESCW
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:CDX44643.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
outer membrane autotransporter barrel domain-containing protein
Displaying 21 items

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