ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5401

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5401_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..948
DNA (948bp) protein (316aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM53_MESCW
SCNpilot_expt_1000_bf_scaffold_5401_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

930..1643
DNA (714bp) protein (238aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:ETA71219.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ETA71219.1};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] rbh
6-phosphogluconolactonase n=1 Tax=Rhizobium loti RepID=UPI000375223A rbh
SCNpilot_expt_1000_bf_scaffold_5401_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1716..3287
DNA (1572bp) protein (524aa)
6-phosphogluconate dehydratase {ECO:0000313|EMBL:CDX43127.1}; EC=4.2.1.12 {ECO:0000313|EMBL:CDX43127.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphogluconate dehydratase (EC:4.2.1.12); K01690 phosphogluconate dehydratase [EC:4.2.1.12]
UPI0003D06C25 related cluster n=1 Tax=unknown RepID=UPI0003D06C25
SCNpilot_expt_1000_bf_scaffold_5401_4
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3550..5250)
DNA (1701bp) protein (567aa)
UPI0003CDE34F related cluster n=1 Tax=unknown RepID=UPI0003CDE34F rbh
von Willebrand factor type A {ECO:0000313|EMBL:ESY73807.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
von Willebrand factor type A; K07114 uncharacterized protein rbh
SCNpilot_expt_1000_bf_scaffold_5401_5
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5416..6903)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X4D7_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68264.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_expt_1000_bf_scaffold_5401_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7065..7967)
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6K4_9RHIZ rbh
HTH-type transcriptional regulator CdhR {ECO:0000313|EMBL:CDX43121.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
AraC family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_5401_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8084..8911)
DNA (828bp) protein (276aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] rbh
UPI0003CFE496 related cluster n=1 Tax=unknown RepID=UPI0003CFE496 rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_5401_8
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9234..9566)
DNA (333bp) protein (111aa)
UPI0003CF411F related cluster n=1 Tax=unknown RepID=UPI0003CF411F
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:ETA71213.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
succinoglycan biosynthesis transport protein
Displaying 8 items

View Taxonomy