ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5471

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5471_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..410
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BI6_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65239.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_5471_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1035..2150
DNA (1116bp) protein (372aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUP9_9RHIZ
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:EHK55539.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
YVTN beta-propeller repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_5471_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2293..3096
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9ADA7_RHIFH
ubiB; putative ubiquinone biosynthesis protein UbiB
Putative ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:AFL54873.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_5471_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3074..3832
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9ADA7_RHIFH
ubiB; putative ubiquinone biosynthesis protein UbiB
Putative ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:AFL54873.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_5471_5
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4102..4818
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DZ15_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFJ89891.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
SCNpilot_expt_1000_bf_scaffold_5471_6
unknown

Not on your lists

comp(4964..5305)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5471_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5799..7247
DNA (1449bp) protein (483aa)
cardiolipin synthetase 2; K06131 cardiolipin synthase [EC:2.7.8.-] rbh
Cardiolipin synthetase 2 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I190_9RHIZ rbh
Cardiolipin synthetase 2 {ECO:0000313|EMBL:EHK53252.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_5471_8
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7397..8095)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFE4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ59989.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5471_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8408..9046
DNA (639bp) protein (213aa)
Signal-transduction protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6F8_9RHIZ rbh
Signal-transduction protein {ECO:0000313|EMBL:EHH12648.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative CBS domain protein
SCNpilot_expt_1000_bf_scaffold_5471_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9071..10432
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6F9_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12649.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5471_11
unknown

Not on your lists

comp(10272..10781)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5471_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11097..12083
DNA (987bp) protein (329aa)
Secretion protein HlyD family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW2_XANP2 rbh
secretion protein HlyD family protein; K01993 HlyD family secretion protein rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABS70058.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5471_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12073..12972
DNA (900bp) protein (300aa)
ABC transporter related n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW1_XANP2
ABC transporter related; K13926 ribosome-dependent ATPase
ABC transporter related {ECO:0000313|EMBL:ABS70057.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5471_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12975..14807
DNA (1833bp) protein (611aa)
ABC transporter related n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW1_XANP2
ABC transporter related; K13926 ribosome-dependent ATPase
ABC transporter related {ECO:0000313|EMBL:ABS70057.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5471_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15158..15907
DNA (750bp) protein (250aa)
ABC-2 type transporter n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW0_XANP2
ABC-2 type transporter; K09686 antibiotic transport system permease protein
ABC-2 type transporter {ECO:0000313|EMBL:ABS70056.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5471_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16171..17802)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI0003821A38
Putative membrane-associated protein {ECO:0000313|EMBL:EJB03372.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
PA-phosphatase-like phosphoesterase
SCNpilot_expt_1000_bf_scaffold_5471_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17922..18206)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI0003821A38
PA-phosphatase-like phosphoesterase
Putative membrane-associated protein {ECO:0000313|EMBL:EJB03372.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
SCNpilot_expt_1000_bf_scaffold_5471_18
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18259..19170)
DNA (912bp) protein (304aa)
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:KGM56288.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KGM56288.1};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Phosphoribosylpyrophosphate synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB5_9GAMM
SCNpilot_expt_1000_bf_scaffold_5471_19
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..20678)
DNA (1512bp) protein (504aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB4_9GAMM
SCNpilot_expt_1000_bf_scaffold_5471_20
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20675..22060)
DNA (1386bp) protein (462aa)
Beta-lactamase domain-containing protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JDF9_9RHOB rbh
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EKE68599.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
beta-lactamase domain-containing protein; K07576 metallo-beta-lactamase family protein rbh
Displaying 20 items

View Taxonomy