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SCNpilot_expt_1000_bf_scaffold_5774

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5774_1
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(69..497)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FV58_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX83385.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5774_2
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1275..2393
DNA (1119bp) protein (373aa)
Mandelate racemase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY90_9BURK rbh
Mandelate racemase {ECO:0000313|EMBL:ETF03989.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
mandelate racemase/muconate lactonizing protein rbh
SCNpilot_expt_1000_bf_scaffold_5774_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2421..3425
DNA (1005bp) protein (335aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:ADB53481.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ADB53481.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD89_CONWI rbh
SCNpilot_expt_1000_bf_scaffold_5774_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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3458..5677
DNA (2220bp) protein (740aa)
Acetoin dehydrogenase (TPP-dependent) beta chain n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFW9_9ACTN
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
Tax=RBG_16_RIF_CHLX_69_14_curated
SCNpilot_expt_1000_bf_scaffold_5774_5
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5568..7313)
DNA (1746bp) protein (582aa)
ABC transporter nucleotide binding/ATPase protein (Sugar) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3J0_AGRVS rbh
ABC transporter nucleotide binding/ATPase protein (sugar) rbh
ABC transporter nucleotide binding/ATPase protein (Sugar) {ECO:0000313|EMBL:ACM39438.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_1000_bf_scaffold_5774_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7310..8359)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00035D7200
Ribose ABC transporter permease {ECO:0000313|EMBL:KDR86848.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
rbsC; ribose ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_5774_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8460..9566)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00038264A1
Sugar ABC transporter (Sugar-binding protein) {ECO:0000313|EMBL:KDR86847.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
sugar ABC transporter (sugar-binding protein)
SCNpilot_expt_1000_bf_scaffold_5774_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9597..10736)
DNA (1140bp) protein (380aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCI2_CONWI rbh
mandelate racemase/muconate lactonizing protein rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADB49455.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_5774_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10751..11503)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUM8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX83377.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Displaying 9 items

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