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SCNpilot_expt_1000_bf_scaffold_5780

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5780_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..481)
DNA (480bp) protein (160aa)
ATP-binding region ATPase domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TI14_MESCW
ATPase domain-containing protein
ATPase domain-containing protein {ECO:0000313|EMBL:EHH11270.1}; Flags: Fragment;; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_5780_2
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(660..1376)
DNA (717bp) protein (239aa)
UPI0003CF459B related cluster n=1 Tax=unknown RepID=UPI0003CF459B rbh
Transcriptional regulator {ECO:0000313|EMBL:ESY96132.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
SCNpilot_expt_1000_bf_scaffold_5780_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1714..2010
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXH6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV08857.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5780_4
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2046..2327
DNA (282bp) protein (94aa)
UPI0003CE8DD6 related cluster n=1 Tax=unknown RepID=UPI0003CE8DD6
Uncharacterized protein {ECO:0000313|EMBL:ESY96130.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5780_5
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2566..2886
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGY7_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44602.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_5780_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3140..3445
DNA (306bp) protein (102aa)
ATP-dependent Clp protease adaptor n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAU1_9RHIZ
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
clpS; ATP-dependent Clp protease adaptor
SCNpilot_expt_1000_bf_scaffold_5780_7
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3476..5563)
DNA (2088bp) protein (696aa)
UPI0003CEB1AA related cluster n=1 Tax=unknown RepID=UPI0003CEB1AA rbh
Membrane protein {ECO:0000313|EMBL:ESY77229.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5780_8
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5565..6092)
DNA (528bp) protein (176aa)
N-terminal double-transmembrane domain-containing protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJ95_MESAW
N-terminal double-transmembrane domain-containing protein
N-terminal double-transmembrane domain-containing protein {ECO:0000313|EMBL:AGB44605.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_5780_9
unknown

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6874..7797
DNA (924bp) protein (308aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5780_10
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..9368)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5FAD2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV08851.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5780_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9368..10372)
DNA (1005bp) protein (335aa)
ATPase AAA n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FL53_9RHIZ rbh
MoxR-like ATPase rbh
ATPase AAA {ECO:0000313|EMBL:ESX78675.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_expt_1000_bf_scaffold_5780_12
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10613..11131
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KKN3_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44608.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_5780_13
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11145..11768
DNA (624bp) protein (208aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TI25_MESCW rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:ADV11283.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_5780_14
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11765..12850
DNA (1086bp) protein (362aa)
polynucleotide adenylyltransferase; K00970 poly(A) polymerase [EC:2.7.7.19] rbh
UPI0003CF7F06 related cluster n=1 Tax=unknown RepID=UPI0003CF7F06 rbh
Poly(A) polymerase {ECO:0000313|EMBL:ESY71381.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_5780_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13039..14016)
DNA (978bp) protein (326aa)
Mlr2725 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HT0_RHILO rbh
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CDX15981.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5780_16
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14098..14583)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000365D355
Uncharacterized protein {ECO:0000313|EMBL:AID32100.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5780_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14933..15118)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E8FBF8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV11285.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_5780_18
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15295..16209)
DNA (915bp) protein (305aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
coproporphyrinogen oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] rbh
UPI0003D048D8 related cluster n=1 Tax=unknown RepID=UPI0003D048D8 rbh
SCNpilot_expt_1000_bf_scaffold_5780_19
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16487..16744
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXF5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX15972.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5780_20
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16859..17206)
DNA (348bp) protein (116aa)
UPI0003CF4EE2 related cluster n=1 Tax=unknown RepID=UPI0003CF4EE2
Uncharacterized protein {ECO:0000313|EMBL:CDX27256.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_expt_1000_bf_scaffold_5780_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17311..17754)
DNA (444bp) protein (148aa)
DNA-binding transcriptional dual regulator,Fe-S center for redox-sensing n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIF1_9RHIZ
DNA-binding transcriptional dual regulator,Fe-S center for redox-sensing {ECO:0000313|EMBL:CCV15863.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
redox-sensitive transcriptional activator SoxR
Displaying 21 items

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